RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 CCDC102AQ96A19 550 aa24.31■■□□□ 1.48
DENND4A-208ENST00000568515 ZSCAN10Q96SZ4 725 aaPredicted RBP24.31■■□□□ 1.48
DENND4A-208ENST00000568515 CHP1Q99653 195 aa24.31■■□□□ 1.48
DENND4A-208ENST00000568515 MTRQ99707 1265 aa24.31■■□□□ 1.48
DENND4A-208ENST00000568515 TRIM34Q9BYJ4 488 aa24.31■■□□□ 1.48
DENND4A-208ENST00000568515 GTPBP6O43824 516 aaPredicted RBP24.31■■□□□ 1.48
DENND4A-208ENST00000568515 IVLP07476 585 aa24.31■■□□□ 1.48
DENND4A-208ENST00000568515 CYP19A1P11511 503 aaPredicted RBP24.31■■□□□ 1.48
DENND4A-208ENST00000568515 SRLQ86TD4 932 aa24.31■■□□□ 1.48
DENND4A-208ENST00000568515 RASSF4Q9H2L5 321 aa24.31■■□□□ 1.48
DENND4A-208ENST00000568515 EPN1Q9Y6I3 576 aaPredicted RBP24.31■■□□□ 1.48
DENND4A-208ENST00000568515 SMIM22K7EJ46 135 aa24.3■■□□□ 1.48
DENND4A-208ENST00000568515 CYP7A1P22680 504 aa24.3■■□□□ 1.48
DENND4A-208ENST00000568515 RBM28Q9NW13 759 aaKnown RBP24.3■■□□□ 1.48
DENND4A-208ENST00000568515 REXO2Q9Y3B8 237 aaKnown RBP24.3■■□□□ 1.48
DENND4A-208ENST00000568515 LRRIQ3A6PVS8 624 aaPredicted RBP24.3■■□□□ 1.48
DENND4A-208ENST00000568515 IFIT1BQ5T764 474 aaKnown RBP24.3■■□□□ 1.48
DENND4A-208ENST00000568515 ACBD3Q9H3P7 528 aa24.3■■□□□ 1.48
DENND4A-208ENST00000568515 ZBTB1Q9Y2K1 713 aa24.3■■□□□ 1.48
DENND4A-208ENST00000568515 RPS6KA5O75582 802 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 NDUFA10O95299 355 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 ZNF658Q5TYW1 1059 aaPredicted RBP24.29■■□□□ 1.48
DENND4A-208ENST00000568515 PYM1Q9BRP8 204 aaKnown RBP24.29■■□□□ 1.48
DENND4A-208ENST00000568515 GUCA1BQ9UMX6 200 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 NUP98P52948 1817 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 TRIM66O15016 1216 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 UBXN1Q04323 297 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 CCDC148Q8NFR7 591 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 TRIM10Q9UDY6 481 aa24.29■■□□□ 1.48
DENND4A-208ENST00000568515 RRP15Q9Y3B9 282 aaKnown RBP24.29■■□□□ 1.48
DENND4A-208ENST00000568515 TRAPPC11Q7Z392 1133 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 ADGRA1Q86SQ6 560 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 C10orf67Q8IYJ2 551 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 MED4Q9NPJ6 270 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 MYH2Q9UKX2 1941 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 ERVV-1B6SEH8 477 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 ZNF34Q8IZ26 560 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 SLC4A9Q96Q91 983 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 RMND1Q9NWS8 449 aa24.28■■□□□ 1.48
DENND4A-208ENST00000568515 PHACTR2O75167 634 aa24.27■■□□□ 1.48
DENND4A-208ENST00000568515 TROAPQ12815 778 aa24.27■■□□□ 1.48
DENND4A-208ENST00000568515 DZIP3Q86Y13 1208 aaKnown RBP24.27■■□□□ 1.48
DENND4A-208ENST00000568515 MAGEB6P1A0A0J9YX57 407 aa24.27■■□□□ 1.48
DENND4A-208ENST00000568515 PSMD14O00487 310 aa24.27■■□□□ 1.48
DENND4A-208ENST00000568515 RPN1P04843 607 aaKnown RBP24.27■■□□□ 1.48
DENND4A-208ENST00000568515 IL17AQ16552 155 aa24.27■■□□□ 1.48
DENND4A-208ENST00000568515 OR8K1Q8NGG5 319 aa24.27■■□□□ 1.48
DENND4A-208ENST00000568515 HAUS4Q9H6D7 363 aa24.27■■□□□ 1.48
DENND4A-208ENST00000568515 SOS2Q07890 1332 aaPredicted RBP24.26■■□□□ 1.47
DENND4A-208ENST00000568515 TTC26A0AVF1 554 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 CALM1P0DP23 149 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 CALM2P0DP24 149 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 CALM3P0DP25 149 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 EVA1CP58658 441 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 TMTC3Q6ZXV5 915 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 MAPK8IP1Q9UQF2 711 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 GDAQ9Y2T3 454 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.26■■□□□ 1.47
DENND4A-208ENST00000568515 PLCH1Q4KWH8 1693 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 H7C1D1 291 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 PRCPP42785 496 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 USP14P54578 494 aa24.26■■□□□ 1.47
DENND4A-208ENST00000568515 DISP2A7MBM2 1401 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 PARP1P09874 1014 aaKnown RBP24.25■■□□□ 1.47
DENND4A-208ENST00000568515 PIK3AP1Q6ZUJ8 805 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 IRF2BP1Q8IU81 584 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 VIPAS39Q9H9C1 493 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 TRAPPC10P48553 1259 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 IQCA1Q86XH1 822 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 MB21D1Q8N884 522 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 HDAC6Q9UBN7 1215 aa24.25■■□□□ 1.47
DENND4A-208ENST00000568515 ENC1O14682 589 aa24.24■■□□□ 1.47
DENND4A-208ENST00000568515 MCM7P33993 719 aa24.24■■□□□ 1.47
DENND4A-208ENST00000568515 LUC7L2Q9Y383 392 aaKnown RBP24.24■■□□□ 1.47
DENND4A-208ENST00000568515 FOXR1Q6PIV2 292 aa24.24■■□□□ 1.47
DENND4A-208ENST00000568515 DNAJC7Q99615 494 aa24.24■■□□□ 1.47
DENND4A-208ENST00000568515 MYH13Q9UKX3 1938 aa24.24■■□□□ 1.47
DENND4A-208ENST00000568515 CNTNAP5Q8WYK1 1306 aa24.24■■□□□ 1.47
DENND4A-208ENST00000568515 CYP2D7A0A087X1C5 515 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 FAM204AQ9H8W3 233 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 ABCF2Q9UG63 623 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 IQSEC3Q9UPP2 1182 aaPredicted RBP24.23■■□□□ 1.47
DENND4A-208ENST00000568515 DDAH1O94760 285 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 AARSP49588 968 aaKnown RBP eCLIP24.23■■□□□ 1.47
DENND4A-208ENST00000568515 NLRP5P59047 1200 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 HERVK_113P62684 666 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 SUSD4Q5VX71 490 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 SRBD1Q8N5C6 995 aaKnown RBP24.23■■□□□ 1.47
DENND4A-208ENST00000568515 MMS19Q96T76 1030 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 SAR1BQ9Y6B6 198 aa24.23■■□□□ 1.47
DENND4A-208ENST00000568515 STRCP1A6NGW2 1772 aa24.22■■□□□ 1.47
DENND4A-208ENST00000568515 LGALS16A8MUM7 142 aa24.22■■□□□ 1.47
DENND4A-208ENST00000568515 ATP1A1P05023 1023 aaKnown RBP24.22■■□□□ 1.47
DENND4A-208ENST00000568515 MCM3P25205 808 aa24.22■■□□□ 1.47
DENND4A-208ENST00000568515 MKRN1Q9UHC7 482 aaKnown RBP24.22■■□□□ 1.47
DENND4A-208ENST00000568515 A0A1W2PQC6 194 aa24.22■■□□□ 1.47
DENND4A-208ENST00000568515 CCDC122Q5T0U0 273 aa24.22■■□□□ 1.47
DENND4A-208ENST00000568515 PAPD7Q5XG87 772 aaKnown RBP24.22■■□□□ 1.47
DENND4A-208ENST00000568515 CTCFLQ8NI51 663 aaPredicted RBP24.22■■□□□ 1.47
DENND4A-208ENST00000568515 ZFP91Q96JP5 570 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms