RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SLC15A5A6NIM6 579 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 VWA5AO00534 786 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 STRNO43815 780 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 NDUFB10O96000 172 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 GJB1P08034 283 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 TSPY3P0CV98 308 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 TSPY8P0CW00 308 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 PTPREP23469 700 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 CHMLP26374 656 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 GRB14Q14449 540 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 MTFR1Q15390 333 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 AKNAD1Q5T1N1 836 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 CENPQQ7L2Z9 268 aaPredicted RBP9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 PLEKHH3Q7Z736 793 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 UBE2Q1Q7Z7E8 422 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 TRMT44Q8IYL2 757 aaKnown RBP9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 ABRAQ8N0Z2 381 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 SPICE1Q8N0Z3 855 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 GMCL1Q96IK5 515 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 TTC14Q96N46 770 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 MOV10L1Q9BXT6 1211 aaKnown RBP9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 SPATC1LQ9H0A9 340 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 PAK6Q9NQU5 681 aaPredicted RBP9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 DIAPH3Q9NSV4 1193 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 CLIP2Q9UDT6 1046 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 RAD50Q92878 1312 aa9.71□□□□□ -0.86
HDGFL3-205ENST00000568129 FLOT1O75955 427 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 FDX1P10109 184 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 EN2P19622 333 aaPredicted RBP9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 GJA8P48165 433 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 UBXN2AP68543 259 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 MAP2K5Q13163 448 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 TMEM132BQ14DG7 1078 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 FAM47AQ5JRC9 791 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 RIOX2Q8IUF8 465 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 STK11IPQ8N1F8 1099 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 PRPF38AQ8NAV1 312 aaKnown RBP9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 NKX2-3Q8TAU0 364 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 ANKS1AQ92625 1134 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 ATG4CQ96DT6 458 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 PAGR1Q9BTK6 254 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 TMEM106CQ9BVX2 250 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 TANGO6Q9C0B7 1094 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 MROH8Q9H579 483 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 FBXO28Q9NVF7 368 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 FEM1BQ9UK73 627 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 ZNF214Q9UL59 606 aaPredicted RBP9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 MYH6P13533 1939 aa9.7□□□□□ -0.86
HDGFL3-205ENST00000568129 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 MCM3APO60318 1980 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 SLC25A27O95847 323 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 HMGCRP04035 888 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 INHAP05111 366 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 CCL5P13501 91 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 ELNP15502 786 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 RGS2P41220 211 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 OAZ1P54368 228 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 FAM83BQ5T0W9 1011 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 RCSD1Q6JBY9 416 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 MFSD6Q6ZSS7 791 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 TRIB2Q92519 343 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 SHISA4Q96DD7 197 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 RNF41Q9H4P4 317 aaPredicted RBP9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 SLC38A10Q9HBR0 1119 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 CTNNA3Q9UI47 895 aa9.69□□□□□ -0.86
HDGFL3-205ENST00000568129 ALPK3Q96L96 1907 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 RPTORQ8N122 1335 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 ZNF213O14771 459 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 SGSM2O43147 1006 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 NMT2O60551 498 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 SGPL1O95470 568 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 SNHG28P0DPA3 235 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 BMP3P12645 472 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 ERCC3P19447 782 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 COPB2P35606 906 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 ATP2B2Q01814 1243 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 OLFML2BQ68BL8 750 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 SLFN13Q68D06 897 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 BTNL9Q6UXG8 535 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 DGKHQ86XP1 1220 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 TBC1D10CQ8IV04 446 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 RUFY2Q8WXA3 655 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 MAP4K1Q92918 833 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 APBA2Q99767 749 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 SLF1Q9BQI6 1058 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 UNC93B1Q9H1C4 597 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 LCTP09848 1927 aa9.68□□□□□ -0.86
HDGFL3-205ENST00000568129 RANBP6O60518 1105 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 TOP1P11387 765 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 CYP2B6P20813 491 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 STAT3P40763 770 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 HAND2P61296 217 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 BMP2KLQ5H9B9 411 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 FAM160B2Q86V87 743 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 NPLOC4Q8TAT6 608 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 CHURC1Q8WUH1 139 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 DCAF4Q8WV16 495 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms