RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CATSPERGQ6ZRH7 1159 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 SUGP1Q8IWZ8 645 aaKnown RBP12.01□□□□□ -0.49
CAPN3-216ENST00000567071 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 PCSK9Q8NBP7 692 aaKnown RBP12.01□□□□□ -0.49
CAPN3-216ENST00000567071 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 C12orf42Q96LP6 360 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 DHX36Q9H2U1 1008 aaKnown RBP12.01□□□□□ -0.49
CAPN3-216ENST00000567071 SPC25Q9HBM1 224 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 EPOPA6NHQ4 379 aa12□□□□□ -0.49
CAPN3-216ENST00000567071 ADAMTS4O75173 837 aa12□□□□□ -0.49
CAPN3-216ENST00000567071 CDK7P50613 346 aa12□□□□□ -0.49
CAPN3-216ENST00000567071 MOV10L1Q9BXT6 1211 aaKnown RBP12□□□□□ -0.49
CAPN3-216ENST00000567071 MROH8Q9H579 483 aa12□□□□□ -0.49
CAPN3-216ENST00000567071 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
CAPN3-216ENST00000567071 TRIOO75962 3097 aa12□□□□□ -0.49
CAPN3-216ENST00000567071 CHD8Q9HCK8 2581 aa12□□□□□ -0.49
CAPN3-216ENST00000567071 GPR75-ASB3A0A0A6YYF3 556 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 SPDYE16A6NNV3 312 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-216ENST00000567071 GDF11O95390 407 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 LDHCP07864 332 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 FCER1AP12319 257 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 ACTN1P12814 892 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 ERCC3P19447 782 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 RHBDL3P58872 404 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 GSTO1P78417 241 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 FAM126BQ8IXS8 530 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-216ENST00000567071 ANKS1AQ92625 1134 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 SUCLG2Q96I99 432 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 SPATC1LQ9H0A9 340 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 PRKAG3Q9UGI9 489 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 SYNRGQ9UMZ2 1314 aa11.99□□□□□ -0.49
CAPN3-216ENST00000567071 TPRP12270 2363 aaKnown RBP11.99□□□□□ -0.49
CAPN3-216ENST00000567071 ZNFX1Q9P2E3 1918 aaKnown RBP11.98□□□□□ -0.49
CAPN3-216ENST00000567071 COL4A4P53420 1690 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-216ENST00000567071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-216ENST00000567071 GRXCR2A6NFK2 248 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 F6X3S4 739 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 KRT37O76014 449 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 PFKMP08237 780 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 VCAM1P19320 739 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 CCL23P55773 120 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 TAP1Q03518 808 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 NCAPG2Q86XI2 1143 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 TEX11Q8IYF3 940 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 ATOH1Q92858 354 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-216ENST00000567071 SLC9A7Q96T83 725 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 NOL10Q9BSC4 688 aaKnown RBP11.98□□□□□ -0.49
CAPN3-216ENST00000567071 TINF2Q9BSI4 451 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 FAM86C1Q9NVL1 165 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 ADAMTS8Q9UP79 889 aa11.98□□□□□ -0.49
CAPN3-216ENST00000567071 ASGR1P07306 291 aa11.97□□□□□ -0.49
CAPN3-216ENST00000567071 C6orf222P0C671 652 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-216ENST00000567071 PLS1Q14651 629 aa11.97□□□□□ -0.49
CAPN3-216ENST00000567071 ATF7IPQ6VMQ6 1270 aa11.97□□□□□ -0.49
CAPN3-216ENST00000567071 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
CAPN3-216ENST00000567071 FOXP4Q8IVH2 680 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-216ENST00000567071 MB21D1Q8N884 522 aa11.97□□□□□ -0.49
CAPN3-216ENST00000567071 KLHDC9Q8NEP7 349 aa11.97□□□□□ -0.49
CAPN3-216ENST00000567071 LENG1Q96BZ8 264 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-216ENST00000567071 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
CAPN3-216ENST00000567071 RPAP3Q9H6T3 665 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-216ENST00000567071 HOXC10Q9NYD6 342 aa11.97□□□□□ -0.49
CAPN3-216ENST00000567071 CST5P28325 142 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-216ENST00000567071 TCF15Q12870 199 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 IER5LQ5T953 404 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 BMP8AQ7Z5Y6 402 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 PHOSPHO2Q8TCD6 241 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
CAPN3-216ENST00000567071 PBXIP1Q96AQ6 731 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 POP1Q99575 1024 aaKnown RBP11.96□□□□□ -0.49
CAPN3-216ENST00000567071 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 KIAA1683Q9H0B3 1180 aa11.96□□□□□ -0.49
CAPN3-216ENST00000567071 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-216ENST00000567071 TECTAO75443 2155 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 DUSP11O75319 330 aaKnown RBP11.95□□□□□ -0.5
CAPN3-216ENST00000567071 RGS20O76081 388 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 CD4P01730 458 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 JAG1P78504 1218 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 MECOMQ03112 1051 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 ZP2Q05996 745 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 COG2Q14746 738 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 GDPD5Q8WTR4 605 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
CAPN3-216ENST00000567071 UMODL1Q5DID0 1318 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 EYA2O00167 538 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 LPXNO60711 386 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 GH2P01242 217 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 ZNF865P0CJ78 1059 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-216ENST00000567071 TAL1P17542 331 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-216ENST00000567071 PHKA1P46020 1223 aa11.94□□□□□ -0.5
CAPN3-216ENST00000567071 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
CAPN3-216ENST00000567071 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-216ENST00000567071 HERC4Q5GLZ8 1057 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-216ENST00000567071 GNASQ5JWF2 1037 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms