RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 MTMR2Q13614 643 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 SHROOM1Q2M3G4 852 aaPredicted RBP19.64■□□□□ 0.73
CLN6-208ENST00000567060 STOX1Q6ZVD7 989 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 MB21D2Q8IYB1 491 aaPredicted RBP19.64■□□□□ 0.73
CLN6-208ENST00000567060 IL27Q8NEV9 243 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 NKX2-3Q8TAU0 364 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 TMEM87BQ96K49 555 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 NEK1Q96PY6 1258 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 IL17RBQ9NRM6 502 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 LOC285556D6RIA3 1793 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 MYH4Q9Y623 1939 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 MYPNQ86TC9 1320 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 BCRP11274 1271 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 GPAT2Q6NUI2 795 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 SIAH1Q8IUQ4 282 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 TMTC2Q8N394 836 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 GMCL1P1Q8NEA9 526 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 ZSCAN10Q96SZ4 725 aaPredicted RBP19.63■□□□□ 0.73
CLN6-208ENST00000567060 TM6SF1Q9BZW5 370 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 RNF208Q9H0X6 261 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 VCPKMTQ9H867 229 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.63■□□□□ 0.73
CLN6-208ENST00000567060 STX8Q9UNK0 236 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 SNX14Q9Y5W7 946 aa19.63■□□□□ 0.73
CLN6-208ENST00000567060 TOP1P11387 765 aaKnown RBP19.62■□□□□ 0.73
CLN6-208ENST00000567060 PRKCZQ05513 592 aa19.62■□□□□ 0.73
CLN6-208ENST00000567060 CCDC84Q86UT8 332 aaPredicted RBP19.62■□□□□ 0.73
CLN6-208ENST00000567060 RASEFQ8IZ41 740 aa19.62■□□□□ 0.73
CLN6-208ENST00000567060 CLIP2Q9UDT6 1046 aa19.62■□□□□ 0.73
CLN6-208ENST00000567060 GABRQQ9UN88 632 aa19.62■□□□□ 0.73
CLN6-208ENST00000567060 AGTPBP1Q9UPW5 1226 aa19.62■□□□□ 0.73
CLN6-208ENST00000567060 A0A1W2PRG0 241 aa19.61■□□□□ 0.73
CLN6-208ENST00000567060 CYP2C8P10632 490 aa19.61■□□□□ 0.73
CLN6-208ENST00000567060 HOXA7P31268 230 aaPredicted RBP19.61■□□□□ 0.73
CLN6-208ENST00000567060 HMGCS2P54868 508 aa19.61■□□□□ 0.73
CLN6-208ENST00000567060 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
CLN6-208ENST00000567060 ACER1Q8TDN7 264 aa19.61■□□□□ 0.73
CLN6-208ENST00000567060 PNMA3Q9UL41 463 aa19.61■□□□□ 0.73
CLN6-208ENST00000567060 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
CLN6-208ENST00000567060 TNKSO95271 1327 aa19.6■□□□□ 0.73
CLN6-208ENST00000567060 WDR46O15213 610 aaKnown RBP19.6■□□□□ 0.73
CLN6-208ENST00000567060 ATP2B2Q01814 1243 aa19.6■□□□□ 0.73
CLN6-208ENST00000567060 RCSD1Q6JBY9 416 aa19.6■□□□□ 0.73
CLN6-208ENST00000567060 U2AF1L4Q8WU68 220 aaKnown RBP19.6■□□□□ 0.73
CLN6-208ENST00000567060 HTATIP2Q9BUP3 242 aa19.6■□□□□ 0.73
CLN6-208ENST00000567060 UNC93B1Q9H1C4 597 aa19.6■□□□□ 0.73
CLN6-208ENST00000567060 EMILIN3Q9NT22 766 aa19.6■□□□□ 0.73
CLN6-208ENST00000567060 BIN2Q9UBW5 565 aaPredicted RBP19.6■□□□□ 0.73
CLN6-208ENST00000567060 LIFRP42702 1097 aa19.59■□□□□ 0.73
CLN6-208ENST00000567060 SEC23AQ15436 765 aa19.59■□□□□ 0.73
CLN6-208ENST00000567060 BLOC1S2Q6QNY1 142 aa19.59■□□□□ 0.73
CLN6-208ENST00000567060 GADL1Q6ZQY3 521 aa19.59■□□□□ 0.73
CLN6-208ENST00000567060 CYB5R4Q7L1T6 521 aa19.59■□□□□ 0.73
CLN6-208ENST00000567060 FBXL16Q8N461 479 aa19.59■□□□□ 0.73
CLN6-208ENST00000567060 ENAHQ8N8S7 591 aaPredicted RBP19.59■□□□□ 0.73
CLN6-208ENST00000567060 GTF3C2Q8WUA4 911 aaPredicted RBP19.59■□□□□ 0.73
CLN6-208ENST00000567060 BACH2Q9BYV9 841 aa19.59■□□□□ 0.73
CLN6-208ENST00000567060 F5H6K3 240 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 IFIT3O14879 490 aaKnown RBP19.58■□□□□ 0.72
CLN6-208ENST00000567060 PRC1O43663 620 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 NMT2O60551 498 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 SGPL1O95470 568 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 SEC24BO95487 1268 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 VCAM1P19320 739 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 FCGRTP55899 365 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 UBXN2AP68543 259 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 KLRC3Q07444 240 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 IFIT1BQ5T764 474 aaKnown RBP19.58■□□□□ 0.72
CLN6-208ENST00000567060 CLEC10AQ8IUN9 316 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 GMCL1Q96IK5 515 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 JAKMIP1Q96N16 626 aaKnown RBP19.58■□□□□ 0.72
CLN6-208ENST00000567060 PARK7Q99497 189 aaKnown RBP19.58■□□□□ 0.72
CLN6-208ENST00000567060 TMEM47Q9BQJ4 181 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 KAT14Q9H8E8 782 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 NR2E3Q9Y5X4 410 aa19.58■□□□□ 0.72
CLN6-208ENST00000567060 USP17L15C9J2P7 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L13C9JLJ4 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L11C9JVI0 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L18D6R9N7 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L22D6RA61 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L17D6RBQ6 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L19D6RCP7 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L20D6RJB6 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 RBM25P49756 843 aaKnown RBP19.57■□□□□ 0.72
CLN6-208ENST00000567060 ANTXR2P58335 489 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 EXOSC10Q01780 885 aaKnown RBP19.57■□□□□ 0.72
CLN6-208ENST00000567060 USP17L24Q0WX57 530 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 WTAPQ15007 396 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 ADCK5Q3MIX3 580 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 SLAIN1Q8ND83 568 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 IGDCC4Q8TDY8 1250 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 DCAF4Q8WV16 495 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 ZSWIM6Q9HCJ5 1215 aa19.57■□□□□ 0.72
CLN6-208ENST00000567060 SOX1O00570 391 aaPredicted RBP19.56■□□□□ 0.72
CLN6-208ENST00000567060 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
CLN6-208ENST00000567060 TMEM67Q5HYA8 995 aa19.56■□□□□ 0.72
CLN6-208ENST00000567060 ZKSCAN3Q9BRR0 538 aa19.56■□□□□ 0.72
CLN6-208ENST00000567060 C22orf23Q9BZE7 217 aa19.56■□□□□ 0.72
CLN6-208ENST00000567060 CYP46A1Q9Y6A2 500 aa19.56■□□□□ 0.72
CLN6-208ENST00000567060 ADCY3O60266 1144 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms