RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 NCLP19338 710 aaKnown RBP18.27■□□□□ 0.51
VAC14-208ENST00000566655 ATP2B2Q01814 1243 aa18.27■□□□□ 0.51
VAC14-208ENST00000566655 TTBK2Q6IQ55 1244 aa18.27■□□□□ 0.51
VAC14-208ENST00000566655 TYW1BQ6NUM6 668 aa18.27■□□□□ 0.51
VAC14-208ENST00000566655 DCAF4Q8WV16 495 aa18.27■□□□□ 0.51
VAC14-208ENST00000566655 SCAND2PQ9GZW5 306 aaPredicted RBP18.27■□□□□ 0.51
VAC14-208ENST00000566655 UBA5Q9GZZ9 404 aa18.27■□□□□ 0.51
VAC14-208ENST00000566655 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.51
VAC14-208ENST00000566655 RTEL1Q9NZ71 1219 aa18.27■□□□□ 0.51
VAC14-208ENST00000566655 F5H6K3 240 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 ADAMTS3O15072 1205 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 KLRC3Q07444 240 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 GPR162Q16538 588 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 SLFN13Q68D06 897 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 WWC2Q6AWC2 1192 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 MTMR8Q96EF0 704 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 GMCL1Q96IK5 515 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 SH3GLB2Q9NR46 395 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 GGA3Q9NZ52 723 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 ZNF112Q9UJU3 913 aa18.26■□□□□ 0.51
VAC14-208ENST00000566655 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
VAC14-208ENST00000566655 STXBP3O00186 592 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 NDUFB10O96000 172 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 NASPP49321 788 aaPredicted RBP18.25■□□□□ 0.51
VAC14-208ENST00000566655 UBE2HP62256 183 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 NR5A1Q13285 461 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 CSPP1Q1MSJ5 1256 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 GPATCH4Q5T3I0 446 aaKnown RBP18.25■□□□□ 0.51
VAC14-208ENST00000566655 NOSTRINQ8IVI9 506 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 ZNF396Q96N95 335 aaPredicted RBP18.25■□□□□ 0.51
VAC14-208ENST00000566655 GPCPD1Q9NPB8 672 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
VAC14-208ENST00000566655 CFAP45Q9UL16 551 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 PPP2R3BQ9Y5P8 575 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 PITPNM2Q9BZ72 1349 aa18.25■□□□□ 0.51
VAC14-208ENST00000566655 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
VAC14-208ENST00000566655 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 XBP1P17861 261 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 ECE1P42892 770 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 EARS2Q5JPH6 523 aaKnown RBP18.24■□□□□ 0.51
VAC14-208ENST00000566655 KCTD1Q719H9 257 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 FAM177A1Q8N128 213 aaPredicted RBP18.24■□□□□ 0.51
VAC14-208ENST00000566655 GPKOWQ92917 476 aaPredicted RBP eCLIP18.24■□□□□ 0.51
VAC14-208ENST00000566655 PGBD1Q96JS3 809 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 SPATA32Q96LK8 384 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 PIGSQ96S52 555 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 BARHL2Q9NY43 387 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 CLIC4Q9Y696 253 aa18.24■□□□□ 0.51
VAC14-208ENST00000566655 SSC5DA1L4H1 1573 aa18.23■□□□□ 0.51
VAC14-208ENST00000566655 M0R2N6 131 aa18.23■□□□□ 0.51
VAC14-208ENST00000566655 TOB1P50616 345 aaPredicted RBP18.23■□□□□ 0.51
VAC14-208ENST00000566655 SAFBQ15424 915 aaKnown RBP eCLIP18.23■□□□□ 0.51
VAC14-208ENST00000566655 LINC00301Q8NCQ3 95 aa18.23■□□□□ 0.51
VAC14-208ENST00000566655 GINM1Q9NU53 330 aa18.23■□□□□ 0.51
VAC14-208ENST00000566655 POLR3EQ9NVU0 708 aa18.23■□□□□ 0.51
VAC14-208ENST00000566655 CTNND1O60716 968 aaKnown RBP18.22■□□□□ 0.51
VAC14-208ENST00000566655 MBD3O95983 291 aa18.22■□□□□ 0.51
VAC14-208ENST00000566655 ASNSP08243 561 aa18.22■□□□□ 0.51
VAC14-208ENST00000566655 LMOD1P29536 600 aaPredicted RBP18.22■□□□□ 0.51
VAC14-208ENST00000566655 KRT2P35908 639 aa18.22■□□□□ 0.51
VAC14-208ENST00000566655 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
VAC14-208ENST00000566655 ADGRF4Q8IZF3 695 aa18.22■□□□□ 0.51
VAC14-208ENST00000566655 RRP36Q96EU6 259 aaKnown RBP18.22■□□□□ 0.51
VAC14-208ENST00000566655 PPP1R11O60927 126 aaPredicted RBP18.21■□□□□ 0.51
VAC14-208ENST00000566655 YEATS4O95619 227 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 SLC1A4P43007 532 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
VAC14-208ENST00000566655 PTPAQ15257 358 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 CCDC96Q2M329 555 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
VAC14-208ENST00000566655 ANO1Q5XXA6 986 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 DAGLBQ8NCG7 672 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 ZNF341Q9BYN7 854 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 GLIS2Q9BZE0 524 aaPredicted RBP18.21■□□□□ 0.51
VAC14-208ENST00000566655 ARHGEF10LQ9HCE6 1279 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 MYH8P13535 1937 aa18.21■□□□□ 0.51
VAC14-208ENST00000566655 FAM205CA6NFA0 338 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 POTECB2RU33 542 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 USP17L10C9JJH3 530 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 INPP5BP32019 993 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 SLC16A2P36021 539 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 NLRP5P59047 1200 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 HEATR3Q7Z4Q2 680 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 CCDC84Q86UT8 332 aaPredicted RBP18.2■□□□□ 0.5
VAC14-208ENST00000566655 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
VAC14-208ENST00000566655 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 TMEM63CQ9P1W3 806 aa18.2■□□□□ 0.5
VAC14-208ENST00000566655 PNMA6FA0A0J9YX94 578 aa18.19■□□□□ 0.5
VAC14-208ENST00000566655 hCG_1984214I3L0E3 225 aa18.19■□□□□ 0.5
VAC14-208ENST00000566655 BMP3P12645 472 aa18.19■□□□□ 0.5
VAC14-208ENST00000566655 DCAF15Q66K64 600 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms