RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
HERC2-208ENST00000566635 FTOQ9C0B1 505 aaKnown RBP eCLIP20.44■□□□□ 0.86
HERC2-208ENST00000566635 TRAK2O60296 914 aa20.44■□□□□ 0.86
HERC2-208ENST00000566635 SLFN13Q68D06 897 aa20.44■□□□□ 0.86
HERC2-208ENST00000566635 TMEM87AQ8NBN3 555 aa20.44■□□□□ 0.86
HERC2-208ENST00000566635 ACER1Q8TDN7 264 aa20.44■□□□□ 0.86
HERC2-208ENST00000566635 FZD1Q9UP38 647 aa20.44■□□□□ 0.86
HERC2-208ENST00000566635 PTMSP20962 102 aa20.43■□□□□ 0.86
HERC2-208ENST00000566635 TTBK2Q6IQ55 1244 aa20.43■□□□□ 0.86
HERC2-208ENST00000566635 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
HERC2-208ENST00000566635 RBM27Q9P2N5 1060 aaKnown RBP20.43■□□□□ 0.86
HERC2-208ENST00000566635 ISY1Q9ULR0 285 aaKnown RBP20.43■□□□□ 0.86
HERC2-208ENST00000566635 ZC3H4Q9UPT8 1303 aaKnown RBP20.43■□□□□ 0.86
HERC2-208ENST00000566635 DOCK1Q14185 1865 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 GADD45BO75293 160 aaPredicted RBP20.42■□□□□ 0.86
HERC2-208ENST00000566635 DLK2Q6UY11 383 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 HOMER1Q86YM7 354 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 PHF20Q9BVI0 1012 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 VAT1LQ9HCJ6 419 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 PITPNM2Q9BZ72 1349 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 BTBD18B2RXH4 712 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 F5H6K3 240 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 NDUFB10O96000 172 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 KLRC3Q07444 240 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 GNL2Q13823 731 aaKnown RBP20.42■□□□□ 0.86
HERC2-208ENST00000566635 BRAPQ7Z569 592 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 GMCL1P1Q8NEA9 526 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 OXER1Q8TDS5 423 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 NUP88Q99567 741 aaPredicted RBP20.42■□□□□ 0.86
HERC2-208ENST00000566635 ARHGEF10LQ9HCE6 1279 aa20.42■□□□□ 0.86
HERC2-208ENST00000566635 GLTPD2A6NH11 291 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 XBP1P17861 261 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 CEBPZQ03701 1054 aaKnown RBP20.41■□□□□ 0.86
HERC2-208ENST00000566635 WWC2Q6AWC2 1192 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 DCAF4Q8WV16 495 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 USP28Q96RU2 1077 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 PIGSQ96S52 555 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 GLIS2Q9BZE0 524 aaPredicted RBP20.41■□□□□ 0.86
HERC2-208ENST00000566635 RIOX1Q9H6W3 641 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 ASNSP08243 561 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 U2AF2P26368 475 aaKnown RBP eCLIP20.41■□□□□ 0.86
HERC2-208ENST00000566635 INPP5BP32019 993 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 SLC16A2P36021 539 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 SLC1A4P43007 532 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 NR5A1Q13285 461 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 SAFBQ15424 915 aaKnown RBP eCLIP20.41■□□□□ 0.86
HERC2-208ENST00000566635 MYSM1Q5VVJ2 828 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 TYW1BQ6NUM6 668 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 PPP2R3BQ9Y5P8 575 aa20.41■□□□□ 0.86
HERC2-208ENST00000566635 ADM5C9JUS6 153 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 SMARCA1P28370 1054 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 NPY5RQ15761 445 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 TPRNQ4KMQ1 711 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 KIAA1755Q5JYT7 1200 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 GPATCH4Q5T3I0 446 aaKnown RBP20.4■□□□□ 0.86
HERC2-208ENST00000566635 DCAF15Q66K64 600 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 HEATR3Q7Z4Q2 680 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 SPICE1Q8N0Z3 855 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 GPT2Q8TD30 523 aa20.4■□□□□ 0.86
HERC2-208ENST00000566635 EPHX2P34913 555 aa20.39■□□□□ 0.86
HERC2-208ENST00000566635 LEO1Q8WVC0 666 aaPredicted RBP20.39■□□□□ 0.86
HERC2-208ENST00000566635 RRP36Q96EU6 259 aaKnown RBP20.39■□□□□ 0.86
HERC2-208ENST00000566635 ZNF341Q9BYN7 854 aa20.39■□□□□ 0.86
HERC2-208ENST00000566635 TMX2Q9Y320 296 aa20.39■□□□□ 0.86
HERC2-208ENST00000566635 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.86
HERC2-208ENST00000566635 SCN4AP35499 1836 aa20.39■□□□□ 0.86
HERC2-208ENST00000566635 ADAMTS3O15072 1205 aa20.39■□□□□ 0.85
HERC2-208ENST00000566635 ZYXQ15942 572 aaKnown RBP20.39■□□□□ 0.85
HERC2-208ENST00000566635 GMCL1Q96IK5 515 aa20.39■□□□□ 0.85
HERC2-208ENST00000566635 SPATA32Q96LK8 384 aa20.39■□□□□ 0.85
HERC2-208ENST00000566635 STXBP3O00186 592 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 KRT2P35908 639 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 NOSTRINQ8IVI9 506 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 ADGRF4Q8IZF3 695 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 DCPSQ96C86 337 aaKnown RBP20.38■□□□□ 0.85
HERC2-208ENST00000566635 ZNF396Q96N95 335 aaPredicted RBP20.38■□□□□ 0.85
HERC2-208ENST00000566635 SCAND2PQ9GZW5 306 aaPredicted RBP20.38■□□□□ 0.85
HERC2-208ENST00000566635 JMJD4Q9H9V9 463 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 SEC63Q9UGP8 760 aaKnown RBP20.38■□□□□ 0.85
HERC2-208ENST00000566635 CTNND1O60716 968 aaKnown RBP20.38■□□□□ 0.85
HERC2-208ENST00000566635 HOOK2Q96ED9 719 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 WRNIP1Q96S55 665 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 FOXP1Q9H334 677 aaPredicted RBP20.38■□□□□ 0.85
HERC2-208ENST00000566635 BARHL2Q9NY43 387 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 SYNPO2Q9UMS6 1093 aa20.38■□□□□ 0.85
HERC2-208ENST00000566635 WDR90Q96KV7 1748 aa20.37■□□□□ 0.85
HERC2-208ENST00000566635 USP17L10C9JJH3 530 aa20.37■□□□□ 0.85
HERC2-208ENST00000566635 NLRP5P59047 1200 aa20.37■□□□□ 0.85
HERC2-208ENST00000566635 CSPP1Q1MSJ5 1256 aa20.37■□□□□ 0.85
HERC2-208ENST00000566635 USP50Q70EL3 339 aaPredicted RBP20.37■□□□□ 0.85
HERC2-208ENST00000566635 CFAP45Q9UL16 551 aa20.37■□□□□ 0.85
HERC2-208ENST00000566635 KLHL40Q2TBA0 621 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 SULF1Q8IWU6 871 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 GOPCQ9HD26 462 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 SH3GLB2Q9NR46 395 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 ZNF112Q9UJU3 913 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 CLIC4Q9Y696 253 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 ELP1O95163 1332 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 FAM205CA6NFA0 338 aa20.36■□□□□ 0.85
HERC2-208ENST00000566635 POTECB2RU33 542 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms