RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 RIN3Q8TB24 985 aa7.06□□□□□ -1.28
CNOT1-209ENST00000566240 MIPEPQ99797 713 aa7.06□□□□□ -1.28
CNOT1-209ENST00000566240 LGR4Q9BXB1 951 aa7.06□□□□□ -1.28
CNOT1-209ENST00000566240 CEP41Q9BYV8 373 aa7.06□□□□□ -1.28
CNOT1-209ENST00000566240 METTL14Q9HCE5 456 aaKnown RBP7.06□□□□□ -1.28
CNOT1-209ENST00000566240 WHRNQ9P202 907 aa7.06□□□□□ -1.28
CNOT1-209ENST00000566240 DAGLAQ9Y4D2 1042 aa7.06□□□□□ -1.28
CNOT1-209ENST00000566240 IRS4O14654 1257 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-209ENST00000566240 SHOXO15266 292 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 CAPNS1P04632 268 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 FGFR1P11362 822 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 MYCLP1P12525 358 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-209ENST00000566240 GRIA2P42262 883 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 FNDC3BQ53EP0 1204 aaKnown RBP7.05□□□□□ -1.28
CNOT1-209ENST00000566240 CDH24Q86UP0 819 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 Q8N3U1 123 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 SEMA6CQ9H3T2 930 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 GP6Q9HCN6 339 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 NOP53Q9NZM5 478 aaKnown RBP7.05□□□□□ -1.28
CNOT1-209ENST00000566240 USP21Q9UK80 565 aa7.05□□□□□ -1.28
CNOT1-209ENST00000566240 PRODHO43272 600 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 GAS2O43903 313 aaKnown RBP7.04□□□□□ -1.28
CNOT1-209ENST00000566240 SLITRK5O94991 958 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 NFICP08651 508 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 PABPC1P11940 636 aaKnown RBP7.04□□□□□ -1.28
CNOT1-209ENST00000566240 ITGA4P13612 1032 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 ETV3P41162 512 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 NSMFQ6X4W1 530 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 THNSL2Q86YJ6 484 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 LENG1Q96BZ8 264 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-209ENST00000566240 RCC1LQ96I51 464 aaKnown RBP7.04□□□□□ -1.28
CNOT1-209ENST00000566240 MRGPRX3Q96LB0 322 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 FBXL18Q96ME1 805 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 CLUHP3Q96NS8 147 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 PSMG3-AS1Q96PY0 264 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 LGR6Q9HBX8 967 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 DDX56Q9NY93 547 aaKnown RBP7.04□□□□□ -1.28
CNOT1-209ENST00000566240 AKT3Q9Y243 479 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 EMC9Q9Y3B6 208 aa7.04□□□□□ -1.28
CNOT1-209ENST00000566240 A0A087WZG4 1122 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 A0A087X0B3 334 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 TBX1O43435 398 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 MARCH6O60337 910 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 GLB1P16278 677 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 CNGA1P29973 690 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 SUMO1P63165 101 aaKnown RBP7.03□□□□□ -1.28
CNOT1-209ENST00000566240 NOL9Q5SY16 702 aaKnown RBP7.03□□□□□ -1.28
CNOT1-209ENST00000566240 POMZP3Q6PJE2 187 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 Q6ZS46 218 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 ARHGEF39Q8N4T4 335 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 ADCY4Q8NFM4 1077 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 CHAC2Q8WUX2 184 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 RNF141Q8WVD5 230 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 OSBP2Q969R2 916 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 YIPF2Q9BWQ6 316 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 ASPNQ9BXN1 380 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 MRPL4Q9BYD3 311 aaKnown RBP7.03□□□□□ -1.28
CNOT1-209ENST00000566240 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 PRDM10Q9NQV6 1147 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 FBXL21Q9UKT6 434 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 PCDHB12Q9Y5F1 795 aa7.03□□□□□ -1.28
CNOT1-209ENST00000566240 DNAJC25-GNG10A0A024R161 153 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 C1QTNF9BB2RNN3 333 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 SPATA31C1P0DKV0 1188 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 STAT3P40763 770 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 ZNF445P59923 1031 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 NBPF9Q3BBW0 867 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 TRIM59Q8IWR1 403 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 CRACR2BQ8N4Y2 399 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-209ENST00000566240 STAG1Q8WVM7 1258 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 EZH1Q92800 747 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-209ENST00000566240 FAM46AQ96IP4 442 aaKnown RBP7.02□□□□□ -1.29
CNOT1-209ENST00000566240 UBL7Q96S82 380 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-209ENST00000566240 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 CAAP1Q9H8G2 361 aa7.02□□□□□ -1.29
CNOT1-209ENST00000566240 DYNC1LI2O43237 492 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-209ENST00000566240 PDE8AO60658 829 aa7.01□□□□□ -1.29
CNOT1-209ENST00000566240 MAP7Q14244 749 aa7.01□□□□□ -1.29
CNOT1-209ENST00000566240 SGO2Q562F6 1265 aa7.01□□□□□ -1.29
CNOT1-209ENST00000566240 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-209ENST00000566240 CD163Q86VB7 1156 aa7.01□□□□□ -1.29
CNOT1-209ENST00000566240 BRF1Q92994 677 aa7.01□□□□□ -1.29
CNOT1-209ENST00000566240 KLHL42Q9P2K6 505 aa7.01□□□□□ -1.29
CNOT1-209ENST00000566240 CGGBP1Q9UFW8 167 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-209ENST00000566240 DIS3Q9Y2L1 958 aaKnown RBP7.01□□□□□ -1.29
CNOT1-209ENST00000566240 FHOD1Q9Y613 1164 aa7.01□□□□□ -1.29
CNOT1-209ENST00000566240 C9orf172C9J069 976 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 KCNH1O95259 989 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 NOS3P29474 1203 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 SOX5P35711 763 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 CHRNA4P43681 627 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 IREB2P48200 963 aaKnown RBP7□□□□□ -1.29
CNOT1-209ENST00000566240 NRG1Q02297 640 aaPredicted RBP7□□□□□ -1.29
CNOT1-209ENST00000566240 PLEKHG6Q3KR16 790 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 SEZ6L2Q6UXD5 910 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 JAMLQ86YT9 394 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 SYTL5Q8TDW5 730 aaPredicted RBP7□□□□□ -1.29
CNOT1-209ENST00000566240 BTN2A2Q8WVV5 523 aa7□□□□□ -1.29
CNOT1-209ENST00000566240 WFDC12Q8WWY7 111 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms