RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PDE8BO95263 885 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 PARP1P09874 1014 aaKnown RBP11.75□□□□□ -0.53
USB1-212ENST00000566082 MCAMP43121 646 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 TNNC1P63316 161 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 NOX5Q96PH1 765 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 SELENOOQ9BVL4 669 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 MYO1AQ9UBC5 1043 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 HDAC6Q9UBN7 1215 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 TUBE1Q9UJT0 475 aa11.75□□□□□ -0.53
USB1-212ENST00000566082 NEURL4Q96JN8 1562 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 SNAP23O00161 211 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
USB1-212ENST00000566082 TXKP42681 527 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 BCAMP50895 628 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 USP49Q70CQ1 688 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 UBN2Q6ZU65 1347 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 USP17L12C9JPN9 530 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 USP17L21D6R901 530 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 CTSWP56202 376 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 RAD9BQ6WBX8 426 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 SRLQ86TD4 932 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 TRIM58Q8NG06 486 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 SELENOSQ9BQE4 189 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
USB1-212ENST00000566082 ERBB3P21860 1342 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 E7EVH7 732 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 NEFHP12036 1026 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 KRT79Q5XKE5 535 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
USB1-212ENST00000566082 ZBTB38Q8NAP3 1195 aaPredicted RBP11.74□□□□□ -0.53
USB1-212ENST00000566082 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 TUBGCP2Q9BSJ2 902 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 TRIM31Q9BZY9 425 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
USB1-212ENST00000566082 NEDD4P46934 1319 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 PPP1R12BO60237 982 aaPredicted RBP11.73□□□□□ -0.53
USB1-212ENST00000566082 CCNT1O60563 726 aaKnown RBP11.73□□□□□ -0.53
USB1-212ENST00000566082 N4BP1O75113 896 aaKnown RBP11.73□□□□□ -0.53
USB1-212ENST00000566082 PPFIA4O75335 1185 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 EZRP15311 586 aaKnown RBP11.73□□□□□ -0.53
USB1-212ENST00000566082 TNNI2P48788 182 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 SLC7A5Q01650 507 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 NCAPHQ15003 741 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 CFAP221Q4G0U5 840 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
USB1-212ENST00000566082 PCCAP05165 728 aaPredicted RBP11.73□□□□□ -0.53
USB1-212ENST00000566082 GUCY1A2P33402 732 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 ZNF76P36508 570 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 LIFRP42702 1097 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 MAGEA9P43362 315 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 PAK2Q13177 524 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 SV2BQ7L1I2 683 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 RASGRP4Q8TDF6 673 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 CABS1Q96KC9 395 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 ZSCAN10Q96SZ4 725 aaPredicted RBP11.73□□□□□ -0.53
USB1-212ENST00000566082 C6orf50Q9HD87 102 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 ABHD10Q9NUJ1 306 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 AATFQ9NY61 560 aaKnown RBP eCLIP11.73□□□□□ -0.53
USB1-212ENST00000566082 EXOC5O00471 708 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 MAP2K2P36507 400 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 PPP2R5BQ15173 497 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 IFI16Q16666 785 aaKnown RBP11.73□□□□□ -0.53
USB1-212ENST00000566082 KIAA0753Q2KHM9 967 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 MSL1Q68DK7 614 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 EFCAB13Q8IY85 973 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 SYNE4Q8N205 404 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 EFCC1Q9HA90 598 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 DENND2AQ9ULE3 1009 aa11.73□□□□□ -0.53
USB1-212ENST00000566082 CALRP27797 417 aaKnown RBP11.72□□□□□ -0.53
USB1-212ENST00000566082 GRIN1Q05586 938 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 INF2Q27J81 1249 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 CNNM4Q6P4Q7 775 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 CABP7Q86V35 215 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 RIN2Q8WYP3 895 aaPredicted RBP11.72□□□□□ -0.53
USB1-212ENST00000566082 IL17RAQ96F46 866 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 RNF26Q9BY78 433 aaPredicted RBP11.72□□□□□ -0.53
USB1-212ENST00000566082 FUT8Q9BYC5 575 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 TMEM51Q9NW97 253 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 RFX7Q2KHR2 1363 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 CEP104O60308 925 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 FXR1P51114 621 aaKnown RBP eCLIP11.72□□□□□ -0.53
USB1-212ENST00000566082 ANTXR2P58335 489 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 CEP85LQ5SZL2 805 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 ICE2Q659A1 982 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 HYOU1Q9Y4L1 999 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 A0A087WUV0 522 aaPredicted RBP11.72□□□□□ -0.53
USB1-212ENST00000566082 UBE2Q2LH0YL09 131 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 GUCY2DQ02846 1103 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 RABL6Q3YEC7 729 aaPredicted RBP11.72□□□□□ -0.53
USB1-212ENST00000566082 SLC9C1Q4G0N8 1177 aa11.72□□□□□ -0.53
USB1-212ENST00000566082 STRBPQ96SI9 672 aaKnown RBP11.72□□□□□ -0.53
USB1-212ENST00000566082 FRMPD1Q5SYB0 1578 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 BAG3O95817 575 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 KRT13P13646 458 aa11.71□□□□□ -0.53
USB1-212ENST00000566082 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
USB1-212ENST00000566082 TBC1D7Q9P0N9 293 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms