RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 TRIM22Q8IYM9 498 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 ZGPATQ8N5A5 531 aaKnown RBP10.37□□□□□ -0.75
CDH13-207ENST00000565636 SUCLG2Q96I99 432 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 TMEM39BQ9GZU3 492 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 GNL3LQ9NVN8 582 aaKnown RBP10.37□□□□□ -0.75
CDH13-207ENST00000565636 FZD1Q9UP38 647 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 SLC45A1Q9Y2W3 748 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 DYRK1BQ9Y463 629 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 ZNF521Q96K83 1311 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 CIAO1O76071 339 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 CLN3Q13286 438 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 FAM43AQ8N2R8 423 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 SCARF2Q96GP6 870 aaPredicted RBP10.36□□□□□ -0.75
CDH13-207ENST00000565636 TRERF1Q96PN7 1200 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 PUS3Q9BZE2 481 aaKnown RBP10.36□□□□□ -0.75
CDH13-207ENST00000565636 USP44Q9H0E7 712 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 BICC1Q9H694 974 aaKnown RBP10.36□□□□□ -0.75
CDH13-207ENST00000565636 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 DOCK3Q8IZD9 2030 aa10.36□□□□□ -0.75
CDH13-207ENST00000565636 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
CDH13-207ENST00000565636 BTBD19C9JJ37 291 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 E9PSI1 815 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 EYA2O00167 538 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 ENTPD3O75355 529 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 MYCP01106 439 aaPredicted RBP10.35□□□□□ -0.75
CDH13-207ENST00000565636 SLC5A1P13866 664 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 EN2P19622 333 aaPredicted RBP10.35□□□□□ -0.75
CDH13-207ENST00000565636 SLC4A8Q2Y0W8 1093 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 WDR44Q5JSH3 913 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 FASTKD5Q7L8L6 764 aaKnown RBP10.35□□□□□ -0.75
CDH13-207ENST00000565636 ANKRD44Q8N8A2 993 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 WRNIP1Q96S55 665 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 IDI2Q9BXS1 227 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 SRRDQ9UH36 339 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 PTPRFP10586 1907 aa10.35□□□□□ -0.75
CDH13-207ENST00000565636 AOX1Q06278 1338 aa10.34□□□□□ -0.75
CDH13-207ENST00000565636 LRRC24Q50LG9 513 aa10.34□□□□□ -0.75
CDH13-207ENST00000565636 DENND2AQ9ULE3 1009 aa10.34□□□□□ -0.75
CDH13-207ENST00000565636 PTCH2Q9Y6C5 1203 aa10.34□□□□□ -0.75
CDH13-207ENST00000565636 A0A1W2PPC1 479 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 GJB1P08034 283 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 GJA8P48165 433 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 UBXN2AP68543 259 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 KANK3Q6NY19 840 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 ZKSCAN4Q969J2 545 aaPredicted RBP10.33□□□□□ -0.76
CDH13-207ENST00000565636 ZNF837Q96EG3 531 aaPredicted RBP10.33□□□□□ -0.76
CDH13-207ENST00000565636 GAS2L1Q99501 681 aaPredicted RBP10.33□□□□□ -0.76
CDH13-207ENST00000565636 HTATIP2Q9BUP3 242 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 CEP126Q9P2H0 1117 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 JAG2Q9Y219 1238 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 DOCK2Q92608 1830 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 ADGRA2Q96PE1 1338 aa10.33□□□□□ -0.76
CDH13-207ENST00000565636 LDHBP07195 334 aaKnown RBP10.32□□□□□ -0.76
CDH13-207ENST00000565636 GRK4P32298 578 aa10.32□□□□□ -0.76
CDH13-207ENST00000565636 IL15P40933 162 aaPredicted RBP10.32□□□□□ -0.76
CDH13-207ENST00000565636 PSMC4P43686 418 aa10.32□□□□□ -0.76
CDH13-207ENST00000565636 RFX5P48382 616 aaPredicted RBP10.32□□□□□ -0.76
CDH13-207ENST00000565636 FXR1P51114 621 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDH13-207ENST00000565636 POU4F2Q12837 409 aa10.32□□□□□ -0.76
CDH13-207ENST00000565636 IRF5Q13568 498 aa10.32□□□□□ -0.76
CDH13-207ENST00000565636 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
CDH13-207ENST00000565636 PARK7Q99497 189 aaKnown RBP10.32□□□□□ -0.76
CDH13-207ENST00000565636 CUEDC1Q9NWM3 386 aaPredicted RBP10.32□□□□□ -0.76
CDH13-207ENST00000565636 PHIPQ8WWQ0 1821 aa10.32□□□□□ -0.76
CDH13-207ENST00000565636 BRCA2P51587 3418 aa10.32□□□□□ -0.76
CDH13-207ENST00000565636 TRIOBPQ9H2D6 2365 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 PDHXO00330 501 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 CTNND1O60716 968 aaKnown RBP10.31□□□□□ -0.76
CDH13-207ENST00000565636 ARHGEF15O94989 841 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 BCRP11274 1271 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 FCGRTP55899 365 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 CAP1Q01518 475 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 CHAF1AQ13111 956 aaPredicted RBP10.31□□□□□ -0.76
CDH13-207ENST00000565636 CDC42EP5Q6NZY7 148 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 TAS1R3Q7RTX0 852 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 UBE2Q1Q7Z7E8 422 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 WHAMMQ8TF30 809 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 ARHGAP45Q92619 1136 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 GRIP2Q9C0E4 1043 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 TIMMDC1Q9NPL8 285 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 AKAP2Q9Y2D5 859 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 NR2E3Q9Y5X4 410 aa10.31□□□□□ -0.76
CDH13-207ENST00000565636 A0A0G2JLL6 359 aaPredicted RBP10.3□□□□□ -0.76
CDH13-207ENST00000565636 PHF20L1A8MW92 1017 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 SPATA31C2B4DYI2 1134 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 MOGSQ13724 837 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 GRIK5Q16478 980 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 PRRT2Q7Z6L0 340 aaPredicted RBP10.3□□□□□ -0.76
CDH13-207ENST00000565636 TRMT2AQ8IZ69 625 aaKnown RBP10.3□□□□□ -0.76
CDH13-207ENST00000565636 SCYL3Q8IZE3 742 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 RAET1EQ8TD07 263 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 USP40Q9NVE5 1235 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 DAGLAQ9Y4D2 1042 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 GAKO14976 1311 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 DOCK1Q14185 1865 aa10.3□□□□□ -0.76
CDH13-207ENST00000565636 TRAK2O60296 914 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms