RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 APBB1O00213 710 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 ZYXQ15942 572 aaKnown RBP13.72□□□□□ -0.21
CAPN3-215ENST00000565559 TMEM240Q5SV17 173 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 RASIP1Q5U651 963 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 ATG9AQ7Z3C6 839 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-215ENST00000565559 NUP133Q8WUM0 1156 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 NKX2-4Q9H2Z4 354 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 WDR70Q9NW82 654 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 BTBD7Q9P203 1132 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 COG5Q9UP83 839 aa13.72□□□□□ -0.21
CAPN3-215ENST00000565559 SMIM22K7EJ46 135 aa13.71□□□□□ -0.21
CAPN3-215ENST00000565559 CIAO1O76071 339 aa13.71□□□□□ -0.21
CAPN3-215ENST00000565559 PRAMEF19Q5SWL8 479 aa13.71□□□□□ -0.21
CAPN3-215ENST00000565559 SIL1Q9H173 461 aa13.71□□□□□ -0.21
CAPN3-215ENST00000565559 C11orf16Q9NQ32 467 aa13.71□□□□□ -0.21
CAPN3-215ENST00000565559 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
CAPN3-215ENST00000565559 MYO9BQ13459 2157 aa13.71□□□□□ -0.22
CAPN3-215ENST00000565559 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.22
CAPN3-215ENST00000565559 MROH7Q68CQ1 1323 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
CAPN3-215ENST00000565559 JAG1P78504 1218 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 PPP2R2DQ66LE6 453 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 ATF7IPQ6VMQ6 1270 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 ZNF365Q70YC5 407 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 TBX21Q9UL17 535 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 PCDHGA4Q9Y5G9 962 aa13.7□□□□□ -0.22
CAPN3-215ENST00000565559 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
CAPN3-215ENST00000565559 PRR33A8MZF0 331 aa13.69□□□□□ -0.22
CAPN3-215ENST00000565559 PGK1P00558 417 aa13.69□□□□□ -0.22
CAPN3-215ENST00000565559 CSF2RAP15509 400 aa13.69□□□□□ -0.22
CAPN3-215ENST00000565559 VCAM1P19320 739 aa13.69□□□□□ -0.22
CAPN3-215ENST00000565559 ADORA1P30542 326 aa13.69□□□□□ -0.22
CAPN3-215ENST00000565559 IL15P40933 162 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-215ENST00000565559 TSEN34Q9BSV6 310 aaKnown RBP13.69□□□□□ -0.22
CAPN3-215ENST00000565559 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
CAPN3-215ENST00000565559 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-215ENST00000565559 PI4K2BG5E9Z4 385 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 COBLO75128 1261 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 BAG3O95817 575 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 GH2P01242 217 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 HLA-DOAP06340 250 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 ACRP10323 421 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 HOXB1P14653 301 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-215ENST00000565559 SHROOM1Q2M3G4 852 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-215ENST00000565559 METTL16Q86W50 562 aaKnown RBP13.68□□□□□ -0.22
CAPN3-215ENST00000565559 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 SHCBP1Q8NEM2 672 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 SH3RF3Q8TEJ3 882 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-215ENST00000565559 NSUN4Q96CB9 384 aaKnown RBP13.68□□□□□ -0.22
CAPN3-215ENST00000565559 MOV10L1Q9BXT6 1211 aaKnown RBP13.68□□□□□ -0.22
CAPN3-215ENST00000565559 DNAJC18Q9H819 358 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
CAPN3-215ENST00000565559 PLXNA1Q9UIW2 1896 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 TLL1O43897 1013 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 ERCC3P19447 782 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 ACLYP53396 1101 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 MVPQ14764 893 aaKnown RBP13.67□□□□□ -0.22
CAPN3-215ENST00000565559 ABRAQ8N0Z2 381 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 ZNF384Q8TF68 577 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 PTCD2Q8WV60 388 aaKnown RBP13.67□□□□□ -0.22
CAPN3-215ENST00000565559 HLA-CQ95604 372 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 MAML3Q96JK9 1138 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 UIMC1Q96RL1 719 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 SPATC1LQ9H0A9 340 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 KIAA1683Q9H0B3 1180 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 MROH8Q9H579 483 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
CAPN3-215ENST00000565559 ZSWIM6Q9HCJ5 1215 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 YBX2Q9Y2T7 364 aaKnown RBP13.67□□□□□ -0.22
CAPN3-215ENST00000565559 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
CAPN3-215ENST00000565559 TLR3O15455 904 aaKnown RBP13.66□□□□□ -0.22
CAPN3-215ENST00000565559 FGBP02675 491 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 AKR1A1P14550 325 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 MAPKAPK5Q8IW41 473 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 GLT1D1Q96MS3 346 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 IL23AQ9NPF7 189 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 HOXC10Q9NYD6 342 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
CAPN3-215ENST00000565559 FLT1P17948 1338 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 NHLH1Q02575 133 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 COG2Q14746 738 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 NCAPG2Q86XI2 1143 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 TGFBRAP1Q8WUH2 860 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 USP44Q9H0E7 712 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
CAPN3-215ENST00000565559 LRP2BPQ9P2M1 347 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 PALD1Q9ULE6 856 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 CNPY2Q9Y2B0 182 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms