RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 TTLL1O95922 423 aa30.49■■■□□ 2.47
NME3-208ENST00000565379 HOXA7P31268 230 aaPredicted RBP30.49■■■□□ 2.47
NME3-208ENST00000565379 GCLCP48506 637 aaPredicted RBP30.49■■■□□ 2.47
NME3-208ENST00000565379 TTC14Q96N46 770 aa30.49■■■□□ 2.47
NME3-208ENST00000565379 FEZ1Q99689 392 aa30.49■■■□□ 2.47
NME3-208ENST00000565379 MCM5P33992 734 aa30.48■■■□□ 2.47
NME3-208ENST00000565379 HERVK_113P62684 666 aa30.48■■■□□ 2.47
NME3-208ENST00000565379 SART3Q15020 963 aaKnown RBP30.48■■■□□ 2.47
NME3-208ENST00000565379 USP17L2Q6R6M4 530 aa30.48■■■□□ 2.47
NME3-208ENST00000565379 CLEC10AQ8IUN9 316 aa30.48■■■□□ 2.47
NME3-208ENST00000565379 SHISA4Q96DD7 197 aa30.48■■■□□ 2.47
NME3-208ENST00000565379 UBAC1Q9BSL1 405 aa30.48■■■□□ 2.47
NME3-208ENST00000565379 NOVP48745 357 aa30.47■■■□□ 2.47
NME3-208ENST00000565379 USP14P54578 494 aa30.47■■■□□ 2.47
NME3-208ENST00000565379 DGKHQ86XP1 1220 aa30.47■■■□□ 2.47
NME3-208ENST00000565379 MB21D2Q8IYB1 491 aaPredicted RBP30.47■■■□□ 2.47
NME3-208ENST00000565379 IL17RAQ96F46 866 aa30.47■■■□□ 2.47
NME3-208ENST00000565379 CEP95Q96GE4 821 aa30.47■■■□□ 2.47
NME3-208ENST00000565379 BIN2Q9UBW5 565 aaPredicted RBP30.47■■■□□ 2.47
NME3-208ENST00000565379 GREB1LQ9C091 1923 aaPredicted RBP30.47■■■□□ 2.47
NME3-208ENST00000565379 WDR19Q8NEZ3 1342 aa30.47■■■□□ 2.47
NME3-208ENST00000565379 ADCY3O60266 1144 aa30.46■■■□□ 2.47
NME3-208ENST00000565379 MKL1Q969V6 931 aa30.46■■■□□ 2.47
NME3-208ENST00000565379 TM6SF1Q9BZW5 370 aa30.46■■■□□ 2.47
NME3-208ENST00000565379 IL17RBQ9NRM6 502 aa30.46■■■□□ 2.47
NME3-208ENST00000565379 MORF4L1Q9UBU8 362 aa30.46■■■□□ 2.47
NME3-208ENST00000565379 ERICH2A1L162 156 aa30.45■■■□□ 2.47
NME3-208ENST00000565379 CCL5P13501 91 aa30.45■■■□□ 2.47
NME3-208ENST00000565379 EEF2P13639 858 aaKnown RBP30.45■■■□□ 2.47
NME3-208ENST00000565379 ZSCAN10Q96SZ4 725 aaPredicted RBP30.45■■■□□ 2.47
NME3-208ENST00000565379 KIAA1683Q9H0B3 1180 aa30.45■■■□□ 2.47
NME3-208ENST00000565379 RBPJLQ9UBG7 517 aa30.45■■■□□ 2.47
NME3-208ENST00000565379 TMX2Q9Y320 296 aa30.45■■■□□ 2.47
NME3-208ENST00000565379 A0A1W2PRG0 241 aa30.44■■■□□ 2.46
NME3-208ENST00000565379 DHX32Q7L7V1 743 aaKnown RBP30.44■■■□□ 2.46
NME3-208ENST00000565379 SLAIN1Q8ND83 568 aa30.44■■■□□ 2.46
NME3-208ENST00000565379 ANKS1AQ92625 1134 aa30.44■■■□□ 2.46
NME3-208ENST00000565379 C12orf42Q96LP6 360 aa30.44■■■□□ 2.46
NME3-208ENST00000565379 JAKMIP1Q96N16 626 aaKnown RBP30.44■■■□□ 2.46
NME3-208ENST00000565379 C22orf23Q9BZE7 217 aa30.44■■■□□ 2.46
NME3-208ENST00000565379 UNC93B1Q9H1C4 597 aa30.44■■■□□ 2.46
NME3-208ENST00000565379 STX8Q9UNK0 236 aa30.44■■■□□ 2.46
NME3-208ENST00000565379 Q3C1V9 767 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 ADCK5Q3MIX3 580 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 CYB5R4Q7L1T6 521 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 SIAH1Q8IUQ4 282 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 COA7Q96BR5 231 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 TMEM87BQ96K49 555 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 PAGR1Q9BTK6 254 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 CLIP2Q9UDT6 1046 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 PLXNB2O15031 1838 aa30.43■■■□□ 2.46
NME3-208ENST00000565379 INHAP05111 366 aa30.42■■■□□ 2.46
NME3-208ENST00000565379 VCAM1P19320 739 aa30.42■■■□□ 2.46
NME3-208ENST00000565379 RBM25P49756 843 aaKnown RBP30.42■■■□□ 2.46
NME3-208ENST00000565379 ATP2B2Q01814 1243 aa30.42■■■□□ 2.46
NME3-208ENST00000565379 BLOC1S2Q6QNY1 142 aa30.42■■■□□ 2.46
NME3-208ENST00000565379 NKX2-3Q8TAU0 364 aa30.42■■■□□ 2.46
NME3-208ENST00000565379 GJD2Q9UKL4 321 aa30.42■■■□□ 2.46
NME3-208ENST00000565379 PRC1O43663 620 aa30.41■■■□□ 2.46
NME3-208ENST00000565379 TOP1P11387 765 aaKnown RBP30.41■■■□□ 2.46
NME3-208ENST00000565379 IRF5Q13568 498 aa30.41■■■□□ 2.46
NME3-208ENST00000565379 KIAA1755Q5JYT7 1200 aa30.41■■■□□ 2.46
NME3-208ENST00000565379 RNF208Q9H0X6 261 aa30.41■■■□□ 2.46
NME3-208ENST00000565379 PORCNQ9H237 461 aa30.41■■■□□ 2.46
NME3-208ENST00000565379 GOPCQ9HD26 462 aa30.41■■■□□ 2.46
NME3-208ENST00000565379 TNKSO95271 1327 aa30.41■■■□□ 2.46
NME3-208ENST00000565379 IFIT3O14879 490 aaKnown RBP30.4■■■□□ 2.46
NME3-208ENST00000565379 NMT2O60551 498 aa30.4■■■□□ 2.46
NME3-208ENST00000565379 CNMDO75829 334 aa30.4■■■□□ 2.46
NME3-208ENST00000565379 TMTC2Q8N394 836 aa30.4■■■□□ 2.46
NME3-208ENST00000565379 LPAR1Q92633 364 aa30.4■■■□□ 2.46
NME3-208ENST00000565379 ZKSCAN3Q9BRR0 538 aa30.4■■■□□ 2.46
NME3-208ENST00000565379 ZSWIM6Q9HCJ5 1215 aa30.4■■■□□ 2.46
NME3-208ENST00000565379 UBXN2AP68543 259 aa30.39■■■□□ 2.46
NME3-208ENST00000565379 EXOSC10Q01780 885 aaKnown RBP30.39■■■□□ 2.46
NME3-208ENST00000565379 ENAHQ8N8S7 591 aaPredicted RBP30.39■■■□□ 2.46
NME3-208ENST00000565379 GPRC5AQ8NFJ5 357 aa30.39■■■□□ 2.46
NME3-208ENST00000565379 VCPKMTQ9H867 229 aa30.39■■■□□ 2.46
NME3-208ENST00000565379 CEP290O15078 2479 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L15C9J2P7 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L13C9JLJ4 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L11C9JVI0 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L18D6R9N7 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L22D6RA61 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L17D6RBQ6 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L19D6RCP7 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L20D6RJB6 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 GJB1P08034 283 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 CASTP20810 708 aaKnown RBP30.38■■■□□ 2.45
NME3-208ENST00000565379 ANTXR2P58335 489 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 ERVK-9P63128 1117 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 ERVK-24P63145 666 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 USP17L24Q0WX57 530 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 TRIM32Q13049 653 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 IFIT1BQ5T764 474 aaKnown RBP30.38■■■□□ 2.45
NME3-208ENST00000565379 RCSD1Q6JBY9 416 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 CATSPERGQ6ZRH7 1159 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 GMCL1P1Q8NEA9 526 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 IL27Q8NEV9 243 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 RPAP3Q9H6T3 665 aaPredicted RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms