RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 PCP11498 1178 aaKnown RBP17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 CHMP4BP1P59074 171 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 ERVK-24P63145 666 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 SLC4A8Q2Y0W8 1093 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 SRGAP1Q7Z6B7 1085 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 DCP1AQ9NPI6 582 aaPredicted RBP17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 DDB1Q16531 1140 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 FUT8Q9BYC5 575 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 RWDD2AQ9UIY3 292 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 CDC23Q9UJX2 597 aa17.5■□□□□ 0.39
GTF3C1-205ENST00000564747 GTPBP6O43824 516 aaPredicted RBP17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 NELFBQ8WX92 580 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 ITIH6Q6UXX5 1313 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 ORC4O43929 436 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 COPB1P53618 953 aaKnown RBP17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 PAK1Q13153 545 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 SMC1AQ14683 1233 aaKnown RBP17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 KIF4BQ2VIQ3 1234 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 SLC35F6Q8N357 371 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 ABHD10Q9NUJ1 306 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 GDAQ9Y2T3 454 aa17.49■□□□□ 0.39
GTF3C1-205ENST00000564747 MYH8P13535 1937 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 FECHP22830 423 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 OAS2P29728 719 aaKnown RBP17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 TRAPPC10P48553 1259 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 SF3B3Q15393 1217 aaKnown RBP17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 TCP11X2Q5H9J9 407 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 CCDC51Q96ER9 411 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 NUP88Q99567 741 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 MYH13Q9UKX3 1938 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 KCNJ18B7U540 433 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 ZBTB22O15209 634 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 PRDX5P30044 214 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 KCNJ12Q14500 433 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 ZNF658Q5TYW1 1059 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 FBXO33Q7Z6M2 555 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 TFCP2L1Q9NZI6 479 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 ZNF652Q9Y2D9 606 aa17.48■□□□□ 0.39
GTF3C1-205ENST00000564747 TSPY2A6NKD2 308 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 RPN1P04843 607 aaKnown RBP17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 PRCPP42785 496 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 LONRF2Q1L5Z9 754 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 C4orf32Q8N8J7 132 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 ANKZF1Q9H8Y5 726 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 JAG2Q9Y219 1238 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 CTAGE9A4FU28 777 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 CRNKL1Q9BZJ0 848 aaKnown RBP17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 COL14A1Q05707 1796 aaKnown RBP17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
GTF3C1-205ENST00000564747 SLF1Q9BQI6 1058 aa17.46■□□□□ 0.39
GTF3C1-205ENST00000564747 CCDC151A5D8V7 595 aa17.46■□□□□ 0.39
GTF3C1-205ENST00000564747 KRT9P35527 623 aa17.46■□□□□ 0.39
GTF3C1-205ENST00000564747 ST5P78524 1137 aa17.46■□□□□ 0.39
GTF3C1-205ENST00000564747 CEP112Q8N8E3 955 aa17.46■□□□□ 0.39
GTF3C1-205ENST00000564747 TMEM51Q9NW97 253 aa17.46■□□□□ 0.39
GTF3C1-205ENST00000564747 TRIM49BA6NDI0 452 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 GTF2E1P29083 439 aaPredicted RBP17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 ARHGAP25P42331 645 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 IRX5P78411 483 aaPredicted RBP17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 UBXN1Q04323 297 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 JAKMIP3Q5VZ66 844 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 CYP26C1Q6V0L0 522 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 IRF2BP1Q8IU81 584 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 BLIDQ8IZY5 108 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 BBXQ8WY36 941 aaPredicted RBP17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 PNKPQ96T60 521 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 CHP1Q99653 195 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 PP2D1A8MPX8 630 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 KCNQ2O43526 872 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 STAT6P42226 847 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 KCNQ4P56696 695 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 SPAG1Q07617 926 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 STAG2Q8N3U4 1231 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 PYM1Q9BRP8 204 aaKnown RBP17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 USP17L8P0C7I0 530 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 BRD3Q15059 726 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 ARL6IP4Q66PJ3 421 aaKnown RBP17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 ANKRD20A12PQ8NF67 263 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 ZBTB9Q96C00 473 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 RMND1Q9NWS8 449 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 A0A1B0GUL6 1792 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 LAMB2P55268 1798 aa17.45■□□□□ 0.38
GTF3C1-205ENST00000564747 ADAMTS2O95450 1211 aa17.44■□□□□ 0.38
GTF3C1-205ENST00000564747 GYS2P54840 703 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms