RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 KIAA1755Q5JYT7 1200 aa15.85■□□□□ 0.13
CLK3-216ENST00000564468 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
CLK3-216ENST00000564468 SH3TC2Q8TF17 1288 aa15.85■□□□□ 0.13
CLK3-216ENST00000564468 CCDC136Q96JN2 1154 aa15.85■□□□□ 0.13
CLK3-216ENST00000564468 NUDT12Q9BQG2 462 aa15.85■□□□□ 0.13
CLK3-216ENST00000564468 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
CLK3-216ENST00000564468 AKNAD1Q5T1N1 836 aa15.84■□□□□ 0.13
CLK3-216ENST00000564468 PLEKHH3Q7Z736 793 aa15.84■□□□□ 0.13
CLK3-216ENST00000564468 GMCL1P1Q8NEA9 526 aa15.84■□□□□ 0.13
CLK3-216ENST00000564468 IVNS1ABPQ9Y6Y0 642 aa15.84■□□□□ 0.13
CLK3-216ENST00000564468 CNMDO75829 334 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 CHMLP26374 656 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 HAND2P61296 217 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 IMMTQ16891 758 aaKnown RBP15.83■□□□□ 0.12
CLK3-216ENST00000564468 RRP12Q5JTH9 1297 aaKnown RBP15.83■□□□□ 0.12
CLK3-216ENST00000564468 FAM83BQ5T0W9 1011 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 GPR142Q7Z601 462 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 TRMT44Q8IYL2 757 aaKnown RBP15.83■□□□□ 0.12
CLK3-216ENST00000564468 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 BTBD7Q9P203 1132 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 GJD2Q9UKL4 321 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 STX8Q9UNK0 236 aa15.83■□□□□ 0.12
CLK3-216ENST00000564468 NDUFB10O96000 172 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 WDR78Q5VTH9 848 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 POTEEQ6S8J3 1075 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
CLK3-216ENST00000564468 SHCBP1Q8NEM2 672 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 ESR2Q92731 530 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 SPATC1LQ9H0A9 340 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 PORCNQ9H237 461 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 TCP11L1Q9NUJ3 509 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 PPP1R9AQ9ULJ8 1098 aa15.82■□□□□ 0.12
CLK3-216ENST00000564468 STRNO43815 780 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 PEX10O60683 326 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 SLC25A27O95847 323 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 XRCC5P13010 732 aaKnown RBP15.81■□□□□ 0.12
CLK3-216ENST00000564468 COPB2P35606 906 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 RGS2P41220 211 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 PLS1Q14651 629 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
CLK3-216ENST00000564468 PRPF38AQ8NAV1 312 aaKnown RBP15.81■□□□□ 0.12
CLK3-216ENST00000564468 NKX2-3Q8TAU0 364 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 SLF1Q9BQI6 1058 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 TRIOBPQ9H2D6 2365 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 MROH8Q9H579 483 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 INCENPQ9NQS7 918 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 FEM1BQ9UK73 627 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 ADAMTS5Q9UNA0 930 aa15.81■□□□□ 0.12
CLK3-216ENST00000564468 CTDP1Q9Y5B0 961 aaPredicted RBP15.81■□□□□ 0.12
CLK3-216ENST00000564468 SLC15A5A6NIM6 579 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 H0YGN5 161 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 MYCP01106 439 aaPredicted RBP15.8■□□□□ 0.12
CLK3-216ENST00000564468 FDX1P10109 184 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 BMP3P12645 472 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 ELNP15502 786 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 CAPN2P17655 700 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 CHURC1Q8WUH1 139 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 GMCL1Q96IK5 515 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 TTC14Q96N46 770 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 MOV10L1Q9BXT6 1211 aaKnown RBP15.8■□□□□ 0.12
CLK3-216ENST00000564468 CNNM2Q9H8M5 875 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 IL17RBQ9NRM6 502 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 FBXO28Q9NVF7 368 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 SZT2Q5T011 3432 aa15.8■□□□□ 0.12
CLK3-216ENST00000564468 VWA5AO00534 786 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 ZBED4O75132 1171 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 HMGCRP04035 888 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 INHAP05111 366 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 TOP1P11387 765 aaKnown RBP15.79■□□□□ 0.12
CLK3-216ENST00000564468 CYP2B6P20813 491 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 PTPREP23469 700 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 SLC1A4P43007 532 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 NOVP48745 357 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 MAP2K5Q13163 448 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 MORN1Q5T089 497 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 FAM160B2Q86V87 743 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 IQCA1Q86XH1 822 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 DPF3Q92784 378 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 NUP88Q99567 741 aaPredicted RBP15.79■□□□□ 0.12
CLK3-216ENST00000564468 KRT23Q9C075 422 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 RNF208Q9H0X6 261 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
CLK3-216ENST00000564468 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 ZNF236Q9UL36 1845 aa15.79■□□□□ 0.12
CLK3-216ENST00000564468 RANBP2P49792 3224 aaKnown RBP15.79■□□□□ 0.12
CLK3-216ENST00000564468 SGSM2O43147 1006 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 CCL5P13501 91 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 ERCC3P19447 782 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 STAT3P40763 770 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 STAT2P52630 851 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 TMEM132BQ14DG7 1078 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 BMP2KLQ5H9B9 411 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 ERICH6BQ5W0A0 696 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 KIAA1211Q6ZU35 1233 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 NCAPG2Q86XI2 1143 aa15.78■□□□□ 0.12
CLK3-216ENST00000564468 TBC1D10CQ8IV04 446 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms