RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	BHMT2	Q9H2M3	363 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	TMCO1	Q9UM00	188 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	GSTTP1	A0A1W2PQM5	241 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	PACS2	Q86VP3	889 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	MMGT1	Q8N4V1	131 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	SAMM50	Q9Y512	469 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	MAP3K12	Q12852	859 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	MKRN3	Q13064	507 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	NR1I3	Q14994	352 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288		A0A1B0GVL5	298 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ASAP2	O43150	1006 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	NDUFA5	Q16718	116 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ZBTB9	Q96C00	473 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	BICC1	Q9H694	974 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	STRN4	Q9NRL3	753 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	EXOC6B	Q9Y2D4	811 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CDC37	Q16543	378 aa	Predicted RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	LRRC37B	Q96QE4	947 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CSRNP2	Q9H175	543 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	EPB41L5	Q9HCM4	733 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	POLE3	Q9NRF9	147 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	RPL13	P26373	211 aa	Known RBP	4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	CFAP70	Q5T0N1	1121 aa		4.69	□□□□□ -1.66
MACF1-231	ENST00000564288	FYB2	Q5VWT5	728 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	DZIP3	Q86Y13	1208 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	SLC40A1	Q9NP59	571 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	SLC26A4	O43511	780 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	DIXDC1	Q155Q3	683 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	CENPT	Q96BT3	561 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ZFAT	Q9P243	1243 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	CFAP65	Q6ZU64	1925 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	KRT18	P05783	430 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	WDR19	Q8NEZ3	1342 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	STXBP4	Q6ZWJ1	553 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	SLF1	Q9BQI6	1058 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	RBL2	Q08999	1139 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ME3	Q16798	604 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	WDR60	Q8WVS4	1066 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	RIOK1	Q9BRS2	568 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	RPL26L1	Q9UNX3	145 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	PRPF6	O94906	941 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	VIL1	P09327	827 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	S100A1	P23297	94 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	KRR1	Q13601	381 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	INTS8	Q75QN2	995 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	MRPL40	Q9NQ50	206 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	TMED10	P49755	219 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ILF2	Q12905	390 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	LBR	Q14739	615 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ATP6V1G3	Q96LB4	118 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	HELLS	Q9NRZ9	838 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	RASGRP2	Q7LDG7	609 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ZFAND2B	Q8WV99	257 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	NRBF2	Q96F24	287 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	BOLA2	Q9H3K6	86 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	C14orf93	Q9H972	538 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	KRT75	O95678	551 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	VCAM1	P19320	739 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	MCUR1	Q96AQ8	359 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	HAUS8	Q9BT25	410 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ABCA9	Q8IUA7	1624 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	KRIT1	O00522	736 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	SEC31A	O94979	1220 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	NBPF15	Q8N660	670 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	MAP1B	P46821	2468 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	LRRC10B	A6NIK2	292 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	NOL3	O60936	208 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	CCT2	P78371	535 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	HACD3	Q9P035	362 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	LRRIQ3	A6PVS8	624 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	PLCB3	Q01970	1234 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ORC2	Q13416	577 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	SEC16B	Q96JE7	1060 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	HAUS2	Q9NVX0	235 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	CTNNA1	P35221	906 aa	Known RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	MAP7D3	Q8IWC1	876 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	HSPA6	P17066	643 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	TRIM68	Q6AZZ1	485 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	NSMCE1	Q8WV22	266 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	ADGRG1	Q9Y653	693 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	CEP170	Q5SW79	1584 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	MAFG	O15525	162 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	DCTN3	O75935	186 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	CCDC153	Q494R4	210 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	KCTD17	Q8N5Z5	321 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	RABGAP1	Q9Y3P9	1069 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	MSANTD4	Q8NCY6	345 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	CFAP61	Q8NHU2	1237 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	NOS1	P29475	1434 aa		4.68	□□□□□ -1.66
MACF1-231	ENST00000564288	NEXMIF	Q5QGS0	1516 aa		4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms