RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 CNMDO75829 334 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 CHMLP26374 656 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 HAND2P61296 217 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 IMMTQ16891 758 aaKnown RBP15.83■□□□□ 0.12
CLK3-213ENST00000563842 RRP12Q5JTH9 1297 aaKnown RBP15.83■□□□□ 0.12
CLK3-213ENST00000563842 FAM83BQ5T0W9 1011 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 GPR142Q7Z601 462 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 TRMT44Q8IYL2 757 aaKnown RBP15.83■□□□□ 0.12
CLK3-213ENST00000563842 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 BTBD7Q9P203 1132 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 GJD2Q9UKL4 321 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 STX8Q9UNK0 236 aa15.83■□□□□ 0.12
CLK3-213ENST00000563842 HTTP42858 3142 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 NDUFB10O96000 172 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 WDR78Q5VTH9 848 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 POTEEQ6S8J3 1075 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
CLK3-213ENST00000563842 SHCBP1Q8NEM2 672 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 ESR2Q92731 530 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 SPATC1LQ9H0A9 340 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 PORCNQ9H237 461 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 TCP11L1Q9NUJ3 509 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 PPP1R9AQ9ULJ8 1098 aa15.82■□□□□ 0.12
CLK3-213ENST00000563842 STRNO43815 780 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 PEX10O60683 326 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 SLC25A27O95847 323 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 XRCC5P13010 732 aaKnown RBP15.81■□□□□ 0.12
CLK3-213ENST00000563842 COPB2P35606 906 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 RGS2P41220 211 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 PLS1Q14651 629 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
CLK3-213ENST00000563842 PRPF38AQ8NAV1 312 aaKnown RBP15.81■□□□□ 0.12
CLK3-213ENST00000563842 NKX2-3Q8TAU0 364 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 SLF1Q9BQI6 1058 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 MROH8Q9H579 483 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 INCENPQ9NQS7 918 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 FEM1BQ9UK73 627 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 ADAMTS5Q9UNA0 930 aa15.81■□□□□ 0.12
CLK3-213ENST00000563842 CTDP1Q9Y5B0 961 aaPredicted RBP15.81■□□□□ 0.12
CLK3-213ENST00000563842 SLC15A5A6NIM6 579 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 FDX1P10109 184 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 BMP3P12645 472 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 ELNP15502 786 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 CAPN2P17655 700 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 CHURC1Q8WUH1 139 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 GMCL1Q96IK5 515 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 TTC14Q96N46 770 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 MOV10L1Q9BXT6 1211 aaKnown RBP15.8■□□□□ 0.12
CLK3-213ENST00000563842 CNNM2Q9H8M5 875 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 IL17RBQ9NRM6 502 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 FBXO28Q9NVF7 368 aa15.8■□□□□ 0.12
CLK3-213ENST00000563842 CENPFP49454 3210 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 VWA5AO00534 786 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 ZBED4O75132 1171 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 HMGCRP04035 888 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 INHAP05111 366 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 TOP1P11387 765 aaKnown RBP15.79■□□□□ 0.12
CLK3-213ENST00000563842 CYP2B6P20813 491 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 PTPREP23469 700 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 SLC1A4P43007 532 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 NOVP48745 357 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 MAP2K5Q13163 448 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 MORN1Q5T089 497 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 FAM160B2Q86V87 743 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 IQCA1Q86XH1 822 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 NUP88Q99567 741 aaPredicted RBP15.79■□□□□ 0.12
CLK3-213ENST00000563842 KRT23Q9C075 422 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 RNF208Q9H0X6 261 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
CLK3-213ENST00000563842 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 ZNF236Q9UL36 1845 aa15.79■□□□□ 0.12
CLK3-213ENST00000563842 POTEFA5A3E0 1075 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 SGSM2O43147 1006 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 MYCP01106 439 aaPredicted RBP15.78■□□□□ 0.12
CLK3-213ENST00000563842 CCL5P13501 91 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 ERCC3P19447 782 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 STAT3P40763 770 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 STAT2P52630 851 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 TMEM132BQ14DG7 1078 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 BMP2KLQ5H9B9 411 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 ERICH6BQ5W0A0 696 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 KIAA1211Q6ZU35 1233 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 NCAPG2Q86XI2 1143 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 TBC1D10CQ8IV04 446 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 USP6NLQ92738 828 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 APBA2Q99767 749 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 NBPF3Q9H094 633 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
CLK3-213ENST00000563842 PLXNA1Q9UIW2 1896 aa15.78■□□□□ 0.12
CLK3-213ENST00000563842 NMT2O60551 498 aa15.77■□□□□ 0.12
CLK3-213ENST00000563842 PLA2G6O60733 806 aa15.77■□□□□ 0.12
CLK3-213ENST00000563842 GJB1P08034 283 aa15.77■□□□□ 0.12
CLK3-213ENST00000563842 ZKSCAN1P17029 563 aaPredicted RBP15.77■□□□□ 0.12
CLK3-213ENST00000563842 MCCP23508 829 aa15.77■□□□□ 0.12
CLK3-213ENST00000563842 TRDNQ13061 729 aa15.77■□□□□ 0.12
CLK3-213ENST00000563842 IKQ13123 557 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms