RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 SIGLEC6O43699 453 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 PRAMEF1O95521 474 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 GJA8P48165 433 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 TMEM67Q5HYA8 995 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 CCDC81Q6ZN84 652 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 RNF111Q6ZNA4 994 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 LSRQ86X29 649 aaPredicted RBP6.23□□□□□ -1.41
GDE1-202ENST00000563645 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 ZNF655Q8N720 491 aaPredicted RBP6.23□□□□□ -1.41
GDE1-202ENST00000563645 PDZD8Q8NEN9 1154 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 DHX38Q92620 1227 aaKnown RBP6.23□□□□□ -1.41
GDE1-202ENST00000563645 SYTL4Q96C24 671 aaPredicted RBP6.23□□□□□ -1.41
GDE1-202ENST00000563645 TCTN2Q96GX1 697 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 DHRS1Q96LJ7 313 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 TGIF2Q9GZN2 237 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.23□□□□□ -1.41
GDE1-202ENST00000563645 EFR3BQ9Y2G0 817 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 PCDHB12Q9Y5F1 795 aa6.23□□□□□ -1.41
GDE1-202ENST00000563645 GUCY2CP25092 1073 aa6.22□□□□□ -1.41
GDE1-202ENST00000563645 PMS1P54277 932 aaKnown RBP6.22□□□□□ -1.41
GDE1-202ENST00000563645 ERVFC1P60507 584 aa6.22□□□□□ -1.41
GDE1-202ENST00000563645 DUSP4Q13115 394 aa6.22□□□□□ -1.41
GDE1-202ENST00000563645 ABHD4Q8TB40 342 aa6.22□□□□□ -1.41
GDE1-202ENST00000563645 MYLIPQ8WY64 445 aa6.22□□□□□ -1.41
GDE1-202ENST00000563645 LIN37Q96GY3 246 aaPredicted RBP6.22□□□□□ -1.41
GDE1-202ENST00000563645 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
GDE1-202ENST00000563645 LRRC10BA6NIK2 292 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 PCBP3P57721 371 aaKnown RBP6.21□□□□□ -1.42
GDE1-202ENST00000563645 AUHQ13825 339 aaKnown RBP6.21□□□□□ -1.42
GDE1-202ENST00000563645 OXR1Q8N573 874 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 USHBP1Q8N6Y0 703 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 SMARCC1Q92922 1105 aaPredicted RBP6.21□□□□□ -1.42
GDE1-202ENST00000563645 FOXP3Q9BZS1 431 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 CCSER2Q9H7U1 834 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 SP110Q9HB58 689 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 CHST7Q9NS84 486 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 GFOD1Q9NXC2 390 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 PRR13Q9NZ81 148 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 ZNF281Q9Y2X9 895 aa6.21□□□□□ -1.42
GDE1-202ENST00000563645 FITM1A5D6W6 292 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 C9IYK1 514 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 FARP2O94887 1054 aaPredicted RBP6.2□□□□□ -1.42
GDE1-202ENST00000563645 SYPP08247 313 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 EIF6P56537 245 aaKnown RBP6.2□□□□□ -1.42
GDE1-202ENST00000563645 CHRNEQ04844 493 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 NR0B2Q15466 257 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 ZYXQ15942 572 aaKnown RBP6.2□□□□□ -1.42
GDE1-202ENST00000563645 MLANAQ16655 118 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 BBS9Q3SYG4 887 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 TDRD10Q5VZ19 366 aaKnown RBP6.2□□□□□ -1.42
GDE1-202ENST00000563645 MPZL3Q6UWV2 235 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 RUFY4Q6ZNE9 571 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 PPFIBP1Q86W92 1011 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 CCDC144CPQ8IYA2 1237 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 LILRA2Q8N149 483 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 ANKS4BQ8N8V4 417 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 LINC00116Q8NCU8 138 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 OR6P1Q8NGX9 317 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 CRBNQ96SW2 442 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 G6PC3Q9BUM1 346 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 SRRTQ9BXP5 876 aaKnown RBP6.2□□□□□ -1.42
GDE1-202ENST00000563645 FBXL21Q9UKT6 434 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 TCFL5Q9UL49 500 aa6.2□□□□□ -1.42
GDE1-202ENST00000563645 SSU72P8A0A1W2PR75 194 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 TMEM82A0PJX8 343 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 SHOXO15266 292 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 C8AP07357 584 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 YBX3P16989 372 aaKnown RBP eCLIP6.19□□□□□ -1.42
GDE1-202ENST00000563645 TRHRP34981 398 aaPredicted RBP6.19□□□□□ -1.42
GDE1-202ENST00000563645 NASPP49321 788 aaPredicted RBP6.19□□□□□ -1.42
GDE1-202ENST00000563645 ZNF648Q5T619 568 aaPredicted RBP6.19□□□□□ -1.42
GDE1-202ENST00000563645 UNC5AQ6ZN44 842 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 C7orf61Q8IZ16 206 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 C19orf47Q8N9M1 422 aaKnown RBP6.19□□□□□ -1.42
GDE1-202ENST00000563645 RNF32Q9H0A6 362 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 ACBD3Q9H3P7 528 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 MINPP1Q9UNW1 487 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 INPP5FQ9Y2H2 1132 aa6.19□□□□□ -1.42
GDE1-202ENST00000563645 MEIS1O00470 390 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 RPL10P27635 214 aaKnown RBP6.18□□□□□ -1.42
GDE1-202ENST00000563645 GIPRP48546 466 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 WAPLQ7Z5K2 1190 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 SPPL2CQ8IUH8 684 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 LINC01599Q8WXQ3 324 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 C19orf44Q9H6X5 657 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 EBF1Q9UH73 591 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 SLC12A7Q9Y666 1083 aa6.18□□□□□ -1.42
GDE1-202ENST00000563645 FKTNO75072 461 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 ENDOUP21128 410 aaKnown RBP6.17□□□□□ -1.42
GDE1-202ENST00000563645 BMP8BP34820 402 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 CTSKP43235 329 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 MESP2Q0VG99 397 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 TIGD5Q53EQ6 642 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 AXDND1Q5T1B0 1012 aaPredicted RBP6.17□□□□□ -1.42
GDE1-202ENST00000563645 DCAF15Q66K64 600 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 CRTC3Q6UUV7 619 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 PRR23BQ6ZRT6 265 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 SEC16BQ96JE7 1060 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 MAP6Q96JE9 813 aa6.17□□□□□ -1.42
GDE1-202ENST00000563645 DSCC1Q9BVC3 393 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms