RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 FOXP3Q9BZS1 431 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 PRDM14Q9GZV8 571 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 METTL5Q9NRN9 209 aaKnown RBP5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 MINPP1Q9UNW1 487 aa5.82□□□□□ -1.48
HMGB1P33-201ENST00000563485 FITM1A5D6W6 292 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 FAM86C2PA6NEL3 165 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 PRAMEF1O95521 474 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 CCNFP41002 786 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 RAD51AP2Q09MP3 1159 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 DUSP4Q13115 394 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 LRRFIP1Q32MZ4 808 aaKnown RBP5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 LILRA2Q8N149 483 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 DAGLBQ8NCG7 672 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 FBXO15Q8NCQ5 510 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 BHLHE22Q8NFJ8 381 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 SLC6A18Q96N87 628 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 SLC9A7Q96T83 725 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 G6PC3Q9BUM1 346 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 DCP1AQ9NPI6 582 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 ZNRF3Q9ULT6 936 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 ZNF281Q9Y2X9 895 aa5.81□□□□□ -1.48
HMGB1P33-201ENST00000563485 TSPAN15O95858 294 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 KRT1P04264 644 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 RPL10P27635 214 aaKnown RBP5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 RAP1GAPP47736 663 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 RACK1P63244 317 aaKnown RBP5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 NR0B2Q15466 257 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 BBS9Q3SYG4 887 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 RNF111Q6ZNA4 994 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 WAPLQ7Z5K2 1190 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 ZNF655Q8N720 491 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 ANKS4BQ8N8V4 417 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 LINC01599Q8WXQ3 324 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 RNF34Q969K3 372 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 PPP1R16BQ96T49 567 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 MKRN2Q9H000 416 aaKnown RBP5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 TCFL5Q9UL49 500 aa5.8□□□□□ -1.48
HMGB1P33-201ENST00000563485 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 TMEM82A0PJX8 343 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 SIGLEC6O43699 453 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 PSPNO60542 156 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 FKTNO75072 461 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 SYPP08247 313 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 C1QTNF9P0C862 333 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 ACRP10323 421 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 GALK1P51570 392 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 PCBP3P57721 371 aaKnown RBP5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 CHRNEQ04844 493 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 SPPL2CQ8IUH8 684 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 CILP2Q8IUL8 1156 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 HOMEZQ8IX15 550 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 GFOD1Q9NXC2 390 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 GPR160Q9UJ42 338 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 ZMYM5Q9UJ78 669 aa5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 DDX41Q9UJV9 622 aaKnown RBP5.79□□□□□ -1.48
HMGB1P33-201ENST00000563485 SSU72P8A0A1W2PR75 194 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 NOTOA8MTQ0 251 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 MEIS1O00470 390 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 USP2O75604 605 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 EFEMP2O95967 443 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 ZPBP2Q6X784 338 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 LINC00116Q8NCU8 138 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 SHISA4Q96DD7 197 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 INTS4Q96HW7 963 aaKnown RBP5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 FERD3LQ96RJ6 166 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 CHST7Q9NS84 486 aa5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 SUCOQ9UBS9 1254 aaKnown RBP5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 YBX2Q9Y2T7 364 aaKnown RBP5.78□□□□□ -1.48
HMGB1P33-201ENST00000563485 C9IYK1 514 aa5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 VAMP1P23763 118 aa5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 AUHQ13825 339 aaKnown RBP5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 TDRD10Q5VZ19 366 aaKnown RBP5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 MAP6Q96JE9 813 aa5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 SLC6A17Q9H1V8 727 aa5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 CWC22Q9HCG8 908 aaKnown RBP5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 FBXL21Q9UKT6 434 aa5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 PPT2Q9UMR5 302 aa5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 PCDHB12Q9Y5F1 795 aa5.77□□□□□ -1.49
HMGB1P33-201ENST00000563485 NFIBO00712 420 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 SCAMP3O14828 347 aaKnown RBP5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 IMPDH2P12268 514 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 CTSKP43235 329 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 FBXW10Q5XX13 1052 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 INTS3Q68E01 1043 aaKnown RBP5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 RUFY4Q6ZNE9 571 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 ZNF605Q86T29 641 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 PPFIBP1Q86W92 1011 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 IRF2BP1Q8IU81 584 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 SIRT2Q8IXJ6 389 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 HHIPL1Q96JK4 782 aa5.76□□□□□ -1.49
HMGB1P33-201ENST00000563485 ETV2O00321 342 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 SHOXO15266 292 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 TMEM253P0C7T8 217 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 CFPP27918 469 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 PDE6BP35913 854 aa5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 KIR2DL1P43626 348 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 KIR2DL2P43627 348 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 PMS1P54277 932 aaKnown RBP5.75□□□□□ -1.49
HMGB1P33-201ENST00000563485 PAK2Q13177 524 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms