RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ERVK-9P63128 1117 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 ERVK-24P63145 666 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 KIF22Q14807 665 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 SLFN13Q68D06 897 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 CYB5R4Q7L1T6 521 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 REPS2Q8NFH8 660 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 GPRC5AQ8NFJ5 357 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 GTF3C2Q8WUA4 911 aaPredicted RBP10.09□□□□□ -0.79
UBR1-204ENST00000563239 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 ESR2Q92731 530 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 ATG4CQ96DT6 458 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 ZKSCAN3Q9BRR0 538 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 TANGO6Q9C0B7 1094 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 PORCNQ9H237 461 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 HOXC10Q9NYD6 342 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 SRRDQ9UH36 339 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 GABRQQ9UN88 632 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 STX8Q9UNK0 236 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 HPS5Q9UPZ3 1129 aa10.09□□□□□ -0.79
UBR1-204ENST00000563239 MYPNQ86TC9 1320 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 MGAMO43451 1857 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 E7EWF7 191 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 SLC27A2O14975 620 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 RAD21O60216 631 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 FLOT1O75955 427 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
UBR1-204ENST00000563239 GNRH1P01148 92 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 NT5C2P49902 561 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 FCGRTP55899 365 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 PRKCZQ05513 592 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 TTC14Q96N46 770 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 GJD2Q9UKL4 321 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 PPP1R9AQ9ULJ8 1098 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 PTCH2Q9Y6C5 1203 aa10.08□□□□□ -0.8
UBR1-204ENST00000563239 VWA5AO00534 786 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 TOP1P11387 765 aaKnown RBP10.07□□□□□ -0.8
UBR1-204ENST00000563239 MCCP23508 829 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 SEC23AQ15436 765 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 PPP4R3BQ5MIZ7 849 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 KIAA1211Q6ZU35 1233 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
UBR1-204ENST00000563239 USP6NLQ92738 828 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 CHMP4CQ96CF2 233 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 ZSCAN10Q96SZ4 725 aaPredicted RBP10.07□□□□□ -0.8
UBR1-204ENST00000563239 SLF1Q9BQI6 1058 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 MOV10L1Q9BXT6 1211 aaKnown RBP10.07□□□□□ -0.8
UBR1-204ENST00000563239 KRT23Q9C075 422 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 CNNM2Q9H8M5 875 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 ANO2Q9NQ90 1003 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 PLXNB2O15031 1838 aa10.07□□□□□ -0.8
UBR1-204ENST00000563239 TNPO2O14787 897 aaKnown RBP10.06□□□□□ -0.8
UBR1-204ENST00000563239 PLA2G6O60733 806 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 SNHG28P0DPA3 235 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 BMP3P12645 472 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 FLT3LGP49771 235 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 PRMT2P55345 433 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 ANTXR2P58335 489 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 MORN1Q5T089 497 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 TTBK2Q6IQ55 1244 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 KCTD1Q719H9 257 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 MB21D2Q8IYB1 491 aaPredicted RBP10.06□□□□□ -0.8
UBR1-204ENST00000563239 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 MB21D1Q8N884 522 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 SPATC1LQ9H0A9 340 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 FEM1BQ9UK73 627 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 ZNF214Q9UL59 606 aaPredicted RBP10.06□□□□□ -0.8
UBR1-204ENST00000563239 TNKSO95271 1327 aa10.06□□□□□ -0.8
UBR1-204ENST00000563239 BRCA2P51587 3418 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 TMEM232C9JQI7 657 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 PDHBP11177 359 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 HOXD10P28358 340 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 MAPK4P31152 587 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 SLC1A4P43007 532 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 IRF5Q13568 498 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 CASC1Q6TDU7 716 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 BTNL9Q6UXG8 535 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 GPR142Q7Z601 462 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 PLEKHH3Q7Z736 793 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 IQCA1Q86XH1 822 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 PRPF38AQ8NAV1 312 aaKnown RBP10.05□□□□□ -0.8
UBR1-204ENST00000563239 DCAF4Q8WV16 495 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 KCNB2Q92953 911 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 COA7Q96BR5 231 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 ARMC5Q96C12 935 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 SLC38A10Q9HBR0 1119 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 DOCK3Q8IZD9 2030 aa10.05□□□□□ -0.8
UBR1-204ENST00000563239 COL11A1P12107 1806 aaPredicted RBP10.05□□□□□ -0.8
UBR1-204ENST00000563239 ATP2A1O14983 1001 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 ERCC3P19447 782 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 PTPREP23469 700 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 CCNA1P78396 465 aa10.04□□□□□ -0.8
UBR1-204ENST00000563239 TSGA10IPQ3SY00 556 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms