RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RBBP8NLQ8NC74 664 aaPredicted RBP5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 MYLIPQ8WY64 445 aa5.16□□□□□ -1.58
SHCBP1-202ENST00000563219 HPXP02790 462 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 KRT1P04264 644 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 CFPP27918 469 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 ERVFC1P60507 584 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 MCF2L2Q86YR7 1114 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 FBXO15Q8NCQ5 510 aaPredicted RBP5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 RNF141Q8WVD5 230 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 TOX2Q96NM4 488 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 DIRC2Q96SL1 478 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 NSUN3Q9H649 340 aaKnown RBP5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 GMIPQ9P107 970 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 DUSP13Q9UII6 198 aa5.15□□□□□ -1.59
SHCBP1-202ENST00000563219 SLC22A31A6NKX4 558 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 CHURC1-FNTBB4DL54 471 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 DNAJA2O60884 412 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 LRRN2O75325 713 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 MLECQ14165 292 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 LRRFIP1Q32MZ4 808 aaKnown RBP5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 ANKLE2Q86XL3 938 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 CCDC74BQ96LY2 380 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 FERD3LQ96RJ6 166 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 SRRTQ9BXP5 876 aaKnown RBP5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 SP110Q9HB58 689 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 USP35Q9P2H5 1018 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 PPT2Q9UMR5 302 aa5.14□□□□□ -1.59
SHCBP1-202ENST00000563219 C1QTNF9P0C862 333 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 DNAJA1P31689 397 aaKnown RBP5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 GIPRP48546 466 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 EGR3Q06889 387 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 CDCP2Q5VXM1 449 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 TAB3Q8N5C8 712 aaPredicted RBP5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 PDZD8Q8NEN9 1154 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 OR6P1Q8NGX9 317 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 BAHD1Q8TBE0 780 aaPredicted RBP5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 SHDQ96IW2 340 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 KREMEN1Q96MU8 473 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.13□□□□□ -1.591e-8■□□□□ 10.6
SHCBP1-202ENST00000563219 KCNK12Q9HB15 430 aa5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 DCP1AQ9NPI6 582 aaPredicted RBP5.13□□□□□ -1.59
SHCBP1-202ENST00000563219 NFIBO00712 420 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 ZGLP1P0C6A0 271 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 TRHRP34981 398 aaPredicted RBP5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 EIF6P56537 245 aaKnown RBP5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 SF3A1Q15459 793 aaKnown RBP5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 INTS3Q68E01 1043 aaKnown RBP5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 OVOS1Q6IE37 1185 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 CCDC81Q6ZN84 652 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 LSRQ86X29 649 aaPredicted RBP5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 C1QL4Q86Z23 238 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 ZSCAN18Q8TBC5 510 aaPredicted RBP5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 SREK1Q8WXA9 508 aaKnown RBP5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 ARMC5Q96C12 935 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 VWCEQ96DN2 955 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 ATG4CQ96DT6 458 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 ASPNQ9BXN1 380 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 EPB41L4BQ9H329 900 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 ANTXR1Q9H6X2 564 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 CNNM2Q9H8M5 875 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 KLHL3Q9UH77 587 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 PCDHA11Q9Y5I1 949 aa5.12□□□□□ -1.59
SHCBP1-202ENST00000563219 LOC105371045A0A1W2PR82 267 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 TNFRSF10CO14798 259 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 TMEM253P0C7T8 217 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 NME1P15531 152 aaKnown RBP5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 LTKP29376 864 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 NR0B2Q15466 257 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 NLRC3Q7RTR2 1065 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 SIAH1Q8IUQ4 282 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 LRRC56Q8IYG6 542 aaPredicted RBP5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 PHACTR4Q8IZ21 702 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 LILRA2Q8N149 483 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 OXR1Q8N573 874 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 C19orf47Q8N9M1 422 aaKnown RBP5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 CPLX3Q8WVH0 158 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 DHX38Q92620 1227 aaKnown RBP5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 CRBNQ96SW2 442 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 KIF2CQ99661 725 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 TM9SF2Q99805 663 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 TANGO6Q9C0B7 1094 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 C19orf44Q9H6X5 657 aa5.11□□□□□ -1.59
SHCBP1-202ENST00000563219 SHISA3A0PJX4 238 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 FITM1A5D6W6 292 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 SSBP05455 408 aaKnown RBP eCLIP5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 MED14OSP0DP75 135 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 CCNFP41002 786 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 ARSHQ5FYA8 562 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 SPPL2CQ8IUH8 684 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 ENOX1Q8TC92 643 aaKnown RBP5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 KCNN1Q92952 543 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 SYTL4Q96C24 671 aaPredicted RBP5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 SLC26A8Q96RN1 970 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 RNF32Q9H0A6 362 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 ZNF281Q9Y2X9 895 aa5.1□□□□□ -1.59
SHCBP1-202ENST00000563219 ETV2O00321 342 aaPredicted RBP5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 RGS13O14921 159 aa5.09□□□□□ -1.59
SHCBP1-202ENST00000563219 ACRP10323 421 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms