RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 FTOQ9C0B1 505 aaKnown RBP eCLIP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 TMX4Q9H1E5 349 aaPredicted RBP8.32□□□□□ -1.08
SCAPER-205ENST00000562948 MYH7BA7E2Y1 1941 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 RNF20Q5VTR2 975 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 FAM184AQ8NB25 1140 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 WNK4Q96J92 1243 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 L3MBTL3Q96JM7 780 aaPredicted RBP8.31□□□□□ -1.08
SCAPER-205ENST00000562948 LOC102724159A0A0B4J2E5 919 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 KIF28PB7ZC32 967 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 EDIL3O43854 480 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 SYT1P21579 422 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 INPP5BP32019 993 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 SEPT2Q15019 361 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 PWP2Q15269 919 aaKnown RBP8.31□□□□□ -1.08
SCAPER-205ENST00000562948 KIF18AQ8NI77 898 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 P2RX7Q99572 595 aaKnown RBP8.31□□□□□ -1.08
SCAPER-205ENST00000562948 MTMR4Q9NYA4 1195 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 GJB2P29033 226 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 LIFRP42702 1097 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 USP17L2Q6R6M4 530 aa8.31□□□□□ -1.08
SCAPER-205ENST00000562948 LRRC47Q8N1G4 583 aaKnown RBP8.31□□□□□ -1.08
SCAPER-205ENST00000562948 NUP88Q99567 741 aaPredicted RBP8.31□□□□□ -1.08
SCAPER-205ENST00000562948 MYO3BQ8WXR4 1341 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 GLTPD2A6NH11 291 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 HNRNPH2P55795 449 aaKnown RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 LRRFIP1Q32MZ4 808 aaKnown RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 TMEM67Q5HYA8 995 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 TTBK2Q6IQ55 1244 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 CREBRFQ8IUR6 639 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 FAM151AQ8WW52 585 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 NACAP1Q9BZK3 213 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 TMX1Q9H3N1 280 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 IFIT3O14879 490 aaKnown RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 ST18O60284 1047 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 NPM3O75607 178 aaKnown RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 MCCP23508 829 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 UVSSAQ2YD98 709 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 EHD4Q9H223 541 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 CWC22Q9HCG8 908 aaKnown RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 WDR19Q8NEZ3 1342 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 GOLGA6L6A8MZA4 724 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 LDHCP07864 332 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 PSEN1P49768 467 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 RAD51AP2Q09MP3 1159 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 KRT32Q14532 448 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 TNIP1Q15025 636 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 SYCP1Q15431 976 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 FOXD4L6Q3SYB3 417 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 FOXD4L3Q6VB84 417 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 KIAA1524Q8TCG1 905 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 ZNF274Q96GC6 653 aaPredicted RBP8.3□□□□□ -1.08
SCAPER-205ENST00000562948 TOMM22Q9NS69 142 aa8.3□□□□□ -1.08
SCAPER-205ENST00000562948 FAM205CA6NFA0 338 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 GOLGA8BA8MQT2 603 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 GH2P01242 217 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 FOSBP53539 338 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 FAM193AP78312 1265 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 OGFOD1Q8N543 542 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 NEDD1Q8NHV4 660 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 PI4KBQ9UBF8 816 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 MTMR6Q9Y217 621 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 LOC285556D6RIA3 1793 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 COL6A3P12111 3177 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 SNHG28P0DPA3 235 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 RPS12P25398 132 aaKnown RBP8.29□□□□□ -1.08
SCAPER-205ENST00000562948 PSMA5P28066 241 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 SNAP25P60880 206 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 CCDC112Q8NEF3 446 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 ANKS1AQ92625 1134 aa8.29□□□□□ -1.08
SCAPER-205ENST00000562948 PTPDC1A2A3K4 754 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 ENTPD3O75355 529 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 EEF2P13639 858 aaKnown RBP8.28□□□□□ -1.08
SCAPER-205ENST00000562948 CLMNQ96JQ2 1002 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 NOL10Q9BSC4 688 aaKnown RBP8.28□□□□□ -1.08
SCAPER-205ENST00000562948 TAF1DQ9H5J8 278 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-205ENST00000562948 TCP11L1Q9NUJ3 509 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 CHD9Q3L8U1 2897 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 DOCK3Q8IZD9 2030 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 TSPY2A6NKD2 308 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 BRD1O95696 1058 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 TPM3P06753 285 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 PDHBP11177 359 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 GUCY1B3Q02153 619 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 PRKG1Q13976 671 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 TMED8Q6PL24 325 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-205ENST00000562948 FAM83AQ86UY5 434 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 SPICE1Q8N0Z3 855 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 FANCBQ8NB91 859 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 OXER1Q8TDS5 423 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 ZNF526Q8TF50 670 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-205ENST00000562948 KCNG1Q9UIX4 513 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 FRMPD2Q68DX3 1309 aaPredicted RBP8.28□□□□□ -1.08
SCAPER-205ENST00000562948 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
SCAPER-205ENST00000562948 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms