RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 U2AF1Q01081 240 aaKnown RBP eCLIP8.03□□□□□ -1.12
TCF4-213ENST00000562543 GRAPQ13588 217 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 SLFNL1Q499Z3 407 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 ZNF790Q6PG37 636 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 SLCO4C1Q6ZQN7 724 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 RNF135Q8IUD6 432 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 PRSS33Q8NF86 280 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 GRAPLQ8TC17 118 aaPredicted RBP8.03□□□□□ -1.12
TCF4-213ENST00000562543 ANKS1AQ92625 1134 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 PRDM12Q9H4Q4 367 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 KLF15Q9UIH9 416 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 RIF1Q5UIP0 2472 aaKnown RBP8.03□□□□□ -1.12
TCF4-213ENST00000562543 PLXNA3P51805 1871 aa8.02□□□□□ -1.12
TCF4-213ENST00000562543 CACNA1HO95180 2353 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 USP2O75604 605 aaPredicted RBP8.02□□□□□ -1.13
TCF4-213ENST00000562543 SASH1O94885 1247 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 ATP4AP20648 1035 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 FLT3LGP49771 235 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 FCGRTP55899 365 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 VAC14Q08AM6 782 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 SUSD4Q5VX71 490 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 TBC1D9Q6ZT07 1266 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 TMC4Q7Z404 712 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 CD163Q86VB7 1156 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 EYA3Q99504 573 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 DEFB129Q9H1M3 183 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 A0A0G2JMZ2 1700 aa8.02□□□□□ -1.13
TCF4-213ENST00000562543 PLXNA1Q9UIW2 1896 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 DCDC2BA2VCK2 349 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 CD33P20138 364 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 CHRNA4P43681 627 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 GDF10P55107 478 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 TIFAQ96CG3 184 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 FMNL2Q96PY5 1086 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 SERTAD1Q9UHV2 236 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 PCDHGC4Q9Y5F7 938 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 PPP2R3BQ9Y5P8 575 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 FLNBO75369 2602 aaKnown RBP8.01□□□□□ -1.13
TCF4-213ENST00000562543 DOCK3Q8IZD9 2030 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 FRMPD3Q5JV73 1810 aa8.01□□□□□ -1.13
TCF4-213ENST00000562543 DMXL1Q9Y485 3027 aa8□□□□□ -1.13
TCF4-213ENST00000562543 GVINP1Q7Z2Y8 2422 aa8□□□□□ -1.13
TCF4-213ENST00000562543 DGKGP49619 791 aa8□□□□□ -1.13
TCF4-213ENST00000562543 EIF4G2P78344 907 aaKnown RBP eCLIP8□□□□□ -1.132e-7■■■■■ 31.9
TCF4-213ENST00000562543 Q8N3U1 123 aa8□□□□□ -1.13
TCF4-213ENST00000562543 ZBED3Q96IU2 234 aaPredicted RBP8□□□□□ -1.13
TCF4-213ENST00000562543 USP16Q9Y5T5 823 aa8□□□□□ -1.13
TCF4-213ENST00000562543 USP3Q9Y6I4 520 aa8□□□□□ -1.13
TCF4-213ENST00000562543 TRIOO75962 3097 aa7.99□□□□□ -1.13
TCF4-213ENST00000562543 ATRNL1Q5VV63 1379 aa7.99□□□□□ -1.13
TCF4-213ENST00000562543 ASH1LQ9NR48 2969 aaKnown RBP7.99□□□□□ -1.13
TCF4-213ENST00000562543 GNB5O14775 395 aa7.99□□□□□ -1.13
TCF4-213ENST00000562543 ATXN7O15265 892 aaPredicted RBP7.99□□□□□ -1.13
TCF4-213ENST00000562543 CETPP11597 493 aa7.99□□□□□ -1.13
TCF4-213ENST00000562543 IGFBP4P22692 258 aa7.99□□□□□ -1.13
TCF4-213ENST00000562543 ARSJQ5FYB0 599 aaPredicted RBP7.99□□□□□ -1.13
TCF4-213ENST00000562543 SLC10A5Q5PT55 438 aa7.99□□□□□ -1.13
TCF4-213ENST00000562543 TBC1D16Q8TBP0 767 aa7.99□□□□□ -1.13
TCF4-213ENST00000562543 RNPC3Q96LT9 517 aaKnown RBP7.99□□□□□ -1.13
TCF4-213ENST00000562543 A0A1W2PNR3 127 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 APBB1O00213 710 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 KHNYNO15037 678 aaKnown RBP7.98□□□□□ -1.13
TCF4-213ENST00000562543 ARAFP10398 606 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 MAPTP10636 758 aaKnown RBP7.98□□□□□ -1.13
TCF4-213ENST00000562543 ALADP13716 330 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 GPTP24298 496 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 GPSM2P81274 684 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 SUPT20HL1Q3ZLR7 823 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 NBPF12Q5TAG4 269 aaPredicted RBP7.98□□□□□ -1.13
TCF4-213ENST00000562543 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.98□□□□□ -1.13
TCF4-213ENST00000562543 CHSY3Q70JA7 882 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 DDX46Q7L014 1031 aaKnown RBP7.98□□□□□ -1.13
TCF4-213ENST00000562543 FCHSD1Q86WN1 690 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 PRKAG2Q9UGJ0 569 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 RALYQ9UKM9 306 aaKnown RBP7.98□□□□□ -1.13
TCF4-213ENST00000562543 ZNF804BA4D1E1 1349 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 ASPMQ8IZT6 3477 aa7.98□□□□□ -1.13
TCF4-213ENST00000562543 AK9Q5TCS8 1911 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 CEMIPQ8WUJ3 1361 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.97□□□□□ -1.13
TCF4-213ENST00000562543 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.97□□□□□ -1.13
TCF4-213ENST00000562543 USP17L3A6NCW0 530 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 USP17L4A6NCW7 530 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 ERVV-1B6SEH8 477 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 ITGB7P26010 798 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 SMTNP53814 917 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 PCBP4P57723 403 aaKnown RBP7.97□□□□□ -1.13
TCF4-213ENST00000562543 TNP2Q05952 138 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 TCF15Q12870 199 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 SULT6B1Q6IMI4 303 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 FIGNL1Q6PIW4 674 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 USP17L1Q7RTZ2 530 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 ZNF34Q8IZ26 560 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 OGFOD1Q8N543 542 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 BADQ92934 168 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 NIFKQ9BYG3 293 aaKnown RBP7.97□□□□□ -1.13
TCF4-213ENST00000562543 ZC3H12CQ9C0D7 883 aaKnown RBP7.97□□□□□ -1.13
TCF4-213ENST00000562543 GDPD2Q9HCC8 539 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 COL4A6Q14031 1691 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms