RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
LPCAT4-202ENST00000562404 F5H6K3 240 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 RAD21O60216 631 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 NMT2O60551 498 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 SGPL1O95470 568 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 PTPREP23469 700 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 TFAP4Q01664 338 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 KLRC3Q07444 240 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 MAP2K5Q13163 448 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 GRB14Q14449 540 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 ALX1Q15699 326 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 RASGRP2Q7LDG7 609 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 SOCS4Q8WXH5 440 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 MKL1Q969V6 931 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 DEFB118Q96PH6 123 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
LPCAT4-202ENST00000562404 CCDC171Q6TFL3 1326 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 FGRP09769 529 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 ERCC3P19447 782 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 RGS2P41220 211 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 CCNA1P78396 465 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 PDE4BQ07343 736 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 CACNB2Q08289 660 aaPredicted RBP13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 PPP1R9AQ9ULJ8 1098 aa13.19□□□□□ -0.3
LPCAT4-202ENST00000562404 SLC15A5A6NIM6 579 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 IGHA2P01877 340 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 TSPY3P0CV98 308 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 TSPY8P0CW00 308 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 CCND3P30281 292 aaPredicted RBP13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 HAND2P61296 217 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 PLS1Q14651 629 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 MB21D1Q8N884 522 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 APBA2Q99767 749 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 CRISPLD2Q9H0B8 497 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 CEP290O15078 2479 aa13.18□□□□□ -0.3
LPCAT4-202ENST00000562404 RPTORQ8N122 1335 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 VWA5AO00534 786 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 COBLO75128 1261 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 TTLL1O95922 423 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 HOXC6P09630 235 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 ZKSCAN1P17029 563 aaPredicted RBP13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 ADORA2AP29274 412 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 PRPF38BQ5VTL8 546 aaKnown RBP13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 TICAM2Q86XR7 235 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 TBC1D10CQ8IV04 446 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 SHCBP1Q8NEM2 672 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 DIS3LQ8TF46 1054 aaKnown RBP13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 ZNF287Q9HBT7 754 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 MCM3APO60318 1980 aa13.17□□□□□ -0.3
LPCAT4-202ENST00000562404 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 ORC4O43929 436 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 TFRCP02786 760 aaKnown RBP13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 NOVP48745 357 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 TTC22Q5TAA0 569 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 TRPV1Q8NER1 839 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 SLF1Q9BQI6 1058 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 HMX1Q9NP08 348 aaPredicted RBP13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 RIPK3Q9Y572 518 aa13.16□□□□□ -0.3
LPCAT4-202ENST00000562404 TSPY2A6NKD2 308 aa13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 CYP2C19P33261 490 aa13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 RRP12Q5JTH9 1297 aaKnown RBP13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 LHX8Q68G74 356 aa13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 RIOX2Q8IUF8 465 aa13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
LPCAT4-202ENST00000562404 NEDD4P46934 1319 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 LCTP09848 1927 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 MCCP23508 829 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 STAT3P40763 770 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 KIFC2Q96AC6 838 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 PAWRQ96IZ0 340 aaKnown RBP13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 MROH8Q9H579 483 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 DIAPH3Q9NSV4 1193 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 OGDHLQ9ULD0 1010 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 SYNPO2Q9UMS6 1093 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
LPCAT4-202ENST00000562404 TMEM232C9JQI7 657 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 STRNO43815 780 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms