RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 EPS15P42566 896 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 TROAPQ12815 778 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 RASA3Q14644 834 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 CERKLQ49MI3 558 aaPredicted RBP12.26□□□□□ -0.45
VAC14-203ENST00000561879 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 DNAJC18Q9H819 358 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 MTMR4Q9NYA4 1195 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 HACL1Q9UJ83 578 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 PITPNM2Q9BZ72 1349 aa12.26□□□□□ -0.45
VAC14-203ENST00000561879 CPLX1O14810 134 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 NMT2O60551 498 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 CTDNEP1O95476 244 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
VAC14-203ENST00000561879 GJB2P29033 226 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 CCT2P78371 535 aaKnown RBP12.25□□□□□ -0.45
VAC14-203ENST00000561879 MYSM1Q5VVJ2 828 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 NSUN7Q8NE18 718 aaKnown RBP12.25□□□□□ -0.45
VAC14-203ENST00000561879 MKL1Q969V6 931 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 TEPSINQ96N21 525 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 TMEM39BQ9GZU3 492 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 DEFB129Q9H1M3 183 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 KANSL2Q9H9L4 492 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.25□□□□□ -0.45
VAC14-203ENST00000561879 GINM1Q9NU53 330 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 RBM28Q9NW13 759 aaKnown RBP12.25□□□□□ -0.45
VAC14-203ENST00000561879 NAP1L2Q9ULW6 460 aaPredicted RBP12.25□□□□□ -0.45
VAC14-203ENST00000561879 SYNPO2Q9UMS6 1093 aa12.25□□□□□ -0.45
VAC14-203ENST00000561879 GOLGA8AA7E2F4 631 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 TTLL1O95922 423 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 AKR1B1P15121 316 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 IFNAR1P17181 557 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 KIF5BP33176 963 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 ADD1P35611 737 aaKnown RBP12.24□□□□□ -0.45
VAC14-203ENST00000561879 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
VAC14-203ENST00000561879 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 NTRK3Q16288 839 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 RTN1Q16799 776 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 TMEM179Q6ZVK1 233 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 NUDT18Q6ZVK8 323 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 USP50Q70EL3 339 aaPredicted RBP12.24□□□□□ -0.45
VAC14-203ENST00000561879 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
VAC14-203ENST00000561879 TRPM4Q8TD43 1214 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 CEP95Q96GE4 821 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 NCOA5Q9HCD5 579 aaKnown RBP12.24□□□□□ -0.45
VAC14-203ENST00000561879 NYAP2Q9P242 653 aa12.24□□□□□ -0.45
VAC14-203ENST00000561879 WDR33Q9C0J8 1336 aaKnown RBP12.23□□□□□ -0.45
VAC14-203ENST00000561879 PTPDC1A2A3K4 754 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 BRD1O95696 1058 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 GNAQP50148 359 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 ABCB5Q2M3G0 1257 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
VAC14-203ENST00000561879 LARP1BQ659C4 914 aaKnown RBP12.23□□□□□ -0.45
VAC14-203ENST00000561879 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 LZTS2Q9BRK4 669 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 CABP5Q9NP86 173 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 POLR3EQ9NVU0 708 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 STX8Q9UNK0 236 aa12.23□□□□□ -0.45
VAC14-203ENST00000561879 STK36Q9NRP7 1315 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 STX6O43752 255 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 JAK2O60674 1132 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 SYT1P21579 422 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 CDC27P30260 824 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 SUPT20HL1Q3ZLR7 823 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 DCAF15Q66K64 600 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 CLEC17AQ6ZS10 378 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 FAM184AQ8NB25 1140 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
VAC14-203ENST00000561879 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 TATDN2Q93075 761 aa12.22□□□□□ -0.45
VAC14-203ENST00000561879 ASTN2O75129 1339 aaPredicted RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 MPHOSPH10O00566 681 aaKnown RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 FDPSP14324 419 aaKnown RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 DNAJB2P25686 324 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 EPHX2P34913 555 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 CAP2P40123 477 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 FUT2Q10981 343 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 GRM4Q14833 912 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 NBPF11Q86T75 865 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 PNMA8AQ86V59 439 aaPredicted RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 TRIM22Q8IYM9 498 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 WASF1Q92558 559 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 DCPSQ96C86 337 aaKnown RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 MYL10Q9BUA6 226 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 RNF26Q9BY78 433 aaPredicted RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 GGA3Q9NZ52 723 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 ORC3Q9UBD5 711 aaPredicted RBP12.21□□□□□ -0.45
VAC14-203ENST00000561879 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 PNMA3Q9UL41 463 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 ZDHHC9Q9Y397 364 aa12.21□□□□□ -0.45
VAC14-203ENST00000561879 PALM3A6NDB9 673 aaPredicted RBP12.2□□□□□ -0.46
VAC14-203ENST00000561879 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms