RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 LRRFIP1Q32MZ4 808 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 NBPF9Q3BBW0 867 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 LCE1DQ5T752 114 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 GK5Q6ZS86 529 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 ZNF655Q8N720 491 aaPredicted RBP8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 KCNN1Q92952 543 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 UBP1Q9NZI7 540 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 GPR160Q9UJ42 338 aa8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 YBX2Q9Y2T7 364 aaKnown RBP8.44□□□□□ -1.06
HMBOX1-216ENST00000561377 SSU72P8A0A1W2PR75 194 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 TIGD5Q53EQ6 642 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 ATG14Q6ZNE5 492 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 NLRC3Q7RTR2 1065 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 C1QL4Q86Z23 238 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 LINC01599Q8WXQ3 324 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 ATG4CQ96DT6 458 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 INTS4Q96HW7 963 aaKnown RBP8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 NT5C1AQ9BXI3 368 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 KCNK12Q9HB15 430 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 ZNF281Q9Y2X9 895 aa8.43□□□□□ -1.06
HMBOX1-216ENST00000561377 NPIPB6E9PJ23 425 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 ETV2O00321 342 aaPredicted RBP8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 CLEC3AO75596 197 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 RPL10P27635 214 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 POLR2BP30876 1174 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 PCBP3P57721 371 aaKnown RBP8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 CLCQ05315 142 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 KCNA10Q16322 511 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 TMC3Q7Z5M5 1100 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 USHBP1Q8N6Y0 703 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 TMEM87AQ8NBN3 555 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 NKD1Q969G9 470 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 TCTN2Q96GX1 697 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 CD320Q9NPF0 282 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 ZMYM5Q9UJ78 669 aa8.42□□□□□ -1.06
HMBOX1-216ENST00000561377 WAPLQ7Z5K2 1190 aa8.41□□□□□ -1.06
HMBOX1-216ENST00000561377 SIAH1Q8IUQ4 282 aa8.41□□□□□ -1.06
HMBOX1-216ENST00000561377 SLITRK4Q8IW52 837 aa8.41□□□□□ -1.06
HMBOX1-216ENST00000561377 G6PC3Q9BUM1 346 aa8.41□□□□□ -1.06
HMBOX1-216ENST00000561377 FOXP3Q9BZS1 431 aa8.41□□□□□ -1.06
HMBOX1-216ENST00000561377 EBF1Q9UH73 591 aa8.41□□□□□ -1.06
HMBOX1-216ENST00000561377 TCFL5Q9UL49 500 aa8.41□□□□□ -1.06
HMBOX1-216ENST00000561377 MEIS3P2A8K0S8 358 aa8.4□□□□□ -1.06
HMBOX1-216ENST00000561377 NME1P15531 152 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-216ENST00000561377 PDE6BP35913 854 aa8.4□□□□□ -1.06
HMBOX1-216ENST00000561377 ZNF605Q86T29 641 aa8.4□□□□□ -1.06
HMBOX1-216ENST00000561377 KIAA0825Q8IV33 1275 aa8.4□□□□□ -1.06
HMBOX1-216ENST00000561377 LINC00116Q8NCU8 138 aa8.4□□□□□ -1.06
HMBOX1-216ENST00000561377 SIGLEC6O43699 453 aa8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 PSPNO60542 156 aa8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 PEX10O60683 326 aa8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 ZSCAN22P10073 491 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 KIR2DL1P43626 348 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 KIR2DL2P43627 348 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 SNW1Q13573 536 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 SPON2Q9BUD6 331 aa8.39□□□□□ -1.07
HMBOX1-216ENST00000561377 TNFRSF10CO14798 259 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 SEMA7AO75326 666 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 PRAMEF1O95521 474 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 SYPP08247 313 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 SLC14A2Q15849 920 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 MAP6Q96JE9 813 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 ZNF512BQ96KM6 892 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 MCOLN1Q9GZU1 580 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 PRDM14Q9GZV8 571 aa8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 MKRN2Q9H000 416 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 SMG5Q9UPR3 1016 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-216ENST00000561377 NRDCO43847 1150 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 USP2O75604 605 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 ZNF76P36508 570 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 TMCO4Q5TGY1 634 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 CIAPIN1Q6FI81 312 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 TMEM132EQ6IEE7 984 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 LCNL1Q6ZST4 164 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 EAF1Q96JC9 268 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 SLC6A18Q96N87 628 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 ANTXR1Q9H6X2 564 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 ZNF552Q9H707 407 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 CHST7Q9NS84 486 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 PCDHB12Q9Y5F1 795 aa8.37□□□□□ -1.07
HMBOX1-216ENST00000561377 TMEM82A0PJX8 343 aa8.36□□□□□ -1.07
HMBOX1-216ENST00000561377 ENDOUP21128 410 aaKnown RBP8.36□□□□□ -1.07
HMBOX1-216ENST00000561377 BBS9Q3SYG4 887 aa8.36□□□□□ -1.07
HMBOX1-216ENST00000561377 CEP128Q6ZU80 1094 aa8.36□□□□□ -1.07
HMBOX1-216ENST00000561377 NLRX1Q86UT6 975 aa8.36□□□□□ -1.07
HMBOX1-216ENST00000561377 TMEM192Q8IY95 271 aa8.36□□□□□ -1.07
HMBOX1-216ENST00000561377 FBXL21Q9UKT6 434 aa8.36□□□□□ -1.07
HMBOX1-216ENST00000561377 MYOCOSA0A1B0GUC4 107 aa8.35□□□□□ -1.07
HMBOX1-216ENST00000561377 OR14I1A6ND48 311 aa8.35□□□□□ -1.07
HMBOX1-216ENST00000561377 FKTNO75072 461 aa8.35□□□□□ -1.07
HMBOX1-216ENST00000561377 IMPDH2P12268 514 aa8.35□□□□□ -1.07
HMBOX1-216ENST00000561377 LINC00310P59036 64 aa8.35□□□□□ -1.07
HMBOX1-216ENST00000561377 FCRL2Q96LA5 508 aaPredicted RBP8.35□□□□□ -1.07
HMBOX1-216ENST00000561377 CRTAC1Q9NQ79 661 aa8.35□□□□□ -1.07
HMBOX1-216ENST00000561377 TEX51A0A1B0GUA7 166 aa8.34□□□□□ -1.07
HMBOX1-216ENST00000561377 NOTOA8MTQ0 251 aa8.34□□□□□ -1.07
HMBOX1-216ENST00000561377 NUAK1O60285 661 aa8.34□□□□□ -1.07
HMBOX1-216ENST00000561377 GALK1P51570 392 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms