RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
TPM1-230ENST00000561266 IMMTQ16891 758 aaKnown RBP16.43■□□□□ 0.22
TPM1-230ENST00000561266 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 CYB5R4Q7L1T6 521 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 GMCL1P1Q8NEA9 526 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 GPRC5AQ8NFJ5 357 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 STX8Q9UNK0 236 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 RABGAP1Q9Y3P9 1069 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 MYPNQ86TC9 1320 aa16.43■□□□□ 0.22
TPM1-230ENST00000561266 CCDC85CA6NKD9 419 aa16.42■□□□□ 0.22
TPM1-230ENST00000561266 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
TPM1-230ENST00000561266 MCCP23508 829 aa16.42■□□□□ 0.22
TPM1-230ENST00000561266 FLT3LGP49771 235 aa16.42■□□□□ 0.22
TPM1-230ENST00000561266 REPS2Q8NFH8 660 aa16.42■□□□□ 0.22
TPM1-230ENST00000561266 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
TPM1-230ENST00000561266 HOXC10Q9NYD6 342 aa16.42■□□□□ 0.22
TPM1-230ENST00000561266 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
TPM1-230ENST00000561266 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
TPM1-230ENST00000561266 CDC45O75419 566 aa16.41■□□□□ 0.22
TPM1-230ENST00000561266 PCP11498 1178 aaKnown RBP16.41■□□□□ 0.22
TPM1-230ENST00000561266 TMEM132BQ14DG7 1078 aa16.41■□□□□ 0.22
TPM1-230ENST00000561266 MOV10L1Q9BXT6 1211 aaKnown RBP16.41■□□□□ 0.22
TPM1-230ENST00000561266 RNF41Q9H4P4 317 aaPredicted RBP16.41■□□□□ 0.22
TPM1-230ENST00000561266 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
TPM1-230ENST00000561266 BRCA2P51587 3418 aa16.41■□□□□ 0.22
TPM1-230ENST00000561266 E7EWF7 191 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 GNRH1P01148 92 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 NECTIN1Q15223 517 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 KCTD1Q719H9 257 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 ESR2Q92731 530 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 SENP2Q9HC62 589 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 SYNPO2Q9UMS6 1093 aa16.4■□□□□ 0.22
TPM1-230ENST00000561266 KIAA0100Q14667 2235 aaKnown RBP16.39■□□□□ 0.22
TPM1-230ENST00000561266 VWA5AO00534 786 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 TOP1P11387 765 aaKnown RBP16.39■□□□□ 0.21
TPM1-230ENST00000561266 BMP3P12645 472 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 ELNP15502 786 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 SNAP25P60880 206 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 GPR142Q7Z601 462 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 ENAHQ8N8S7 591 aaPredicted RBP16.39■□□□□ 0.21
TPM1-230ENST00000561266 GTF3C2Q8WUA4 911 aaPredicted RBP16.39■□□□□ 0.21
TPM1-230ENST00000561266 USP6NLQ92738 828 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 ARMC5Q96C12 935 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 SPATC1LQ9H0A9 340 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 ANO2Q9NQ90 1003 aa16.39■□□□□ 0.21
TPM1-230ENST00000561266 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 SLC27A2O14975 620 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 MYCP01106 439 aaPredicted RBP16.38■□□□□ 0.21
TPM1-230ENST00000561266 HOXD10P28358 340 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 ANTXR2P58335 489 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 ARHGEF6Q15052 776 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 SEC23AQ15436 765 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 MORN1Q5T089 497 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 CHST3Q7LGC8 479 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 ANKS1AQ92625 1134 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 COA7Q96BR5 231 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 GMCL1Q96IK5 515 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
TPM1-230ENST00000561266 RIPK3Q9Y572 518 aa16.38■□□□□ 0.21
TPM1-230ENST00000561266 TAL1P17542 331 aaPredicted RBP16.37■□□□□ 0.21
TPM1-230ENST00000561266 ERCC3P19447 782 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 SLC1A4P43007 532 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 PRMT2P55345 433 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 SOX10P56693 466 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 TRIM32Q13049 653 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 PLS1Q14651 629 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 MTFR1Q15390 333 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 KIAA1211Q6ZU35 1233 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 PLEKHH3Q7Z736 793 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 RAET1EQ8TD07 263 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 TTC14Q96N46 770 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 ZSCAN10Q96SZ4 725 aaPredicted RBP16.37■□□□□ 0.21
TPM1-230ENST00000561266 KRT23Q9C075 422 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
TPM1-230ENST00000561266 FEM1BQ9UK73 627 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 TNKSO95271 1327 aa16.37■□□□□ 0.21
TPM1-230ENST00000561266 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
TPM1-230ENST00000561266 ADCY3O60266 1144 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 PDHBP11177 359 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 CYP2B6P20813 491 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 PTPREP23469 700 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 MAPK4P31152 587 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 GRK4P32298 578 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 SLC16A2P36021 539 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 IRF5Q13568 498 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 DGKHQ86XP1 1220 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 MB21D2Q8IYB1 491 aaPredicted RBP16.36■□□□□ 0.21
TPM1-230ENST00000561266 RASEFQ8IZ41 740 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 PRPF38AQ8NAV1 312 aaKnown RBP16.36■□□□□ 0.21
TPM1-230ENST00000561266 CPVLQ9H3G5 476 aa16.36■□□□□ 0.21
TPM1-230ENST00000561266 POTEFA5A3E0 1075 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 SNHG28P0DPA3 235 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms