RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, human

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-222	ENST00000561208	ATP7B	P35670	1465 aa		11.76	□□□□□ -0.53
MEIS2-222	ENST00000561208	NDUFA10	O95299	355 aa		11.76	□□□□□ -0.53
MEIS2-222	ENST00000561208	CLTA	P09496	248 aa		11.76	□□□□□ -0.53
MEIS2-222	ENST00000561208	IQCB1	Q15051	598 aa		11.76	□□□□□ -0.53
MEIS2-222	ENST00000561208	CCDC38	Q502W7	563 aa		11.76	□□□□□ -0.53
MEIS2-222	ENST00000561208	SNX29	Q8TEQ0	813 aa		11.76	□□□□□ -0.53
MEIS2-222	ENST00000561208	ODF2L	Q9ULJ1	636 aa		11.76	□□□□□ -0.53
MEIS2-222	ENST00000561208	TMEM232	C9JQI7	657 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	KRIT1	O00522	736 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	EEF1G	P26641	437 aa	Known RBP	11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	SIRT1	Q96EB6	747 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	TUBGCP2	Q9BSJ2	902 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	IGSF1	Q8N6C5	1336 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	PDE6A	P16499	860 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	LRRC24	Q50LG9	513 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	E4F1	Q66K89	784 aa	Predicted RBP	11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	FAM184B	Q9ULE4	1060 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	STK38L	Q9Y2H1	464 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	TBX22	Q9Y458	520 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	MED23	Q9ULK4	1368 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	C6orf229	H3BNL8	230 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	MFAP3L	O75121	409 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	ARID4A	P29374	1257 aa	Predicted RBP	11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	CLUL1	Q15846	466 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	CCDC170	Q8IYT3	715 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	VCX	Q9H320	206 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	GPR108	Q9NPR9	543 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	HOMER3	Q9NSC5	361 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	KCNA6	P17658	529 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	C2orf54	Q08AI8	447 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	RETREG2	Q8NC44	543 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	DENND2A	Q9ULE3	1009 aa		11.75	□□□□□ -0.53
MEIS2-222	ENST00000561208	HIP1R	O75146	1068 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	HEXIM1	O94992	359 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	PPARA	Q07869	468 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	NNT	Q13423	1086 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	LRCH2	Q5VUJ6	765 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	FYB2	Q5VWT5	728 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	ALS2CL	Q60I27	953 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	PPP4R3A	Q6IN85	833 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	EEF2KMT	Q96G04	330 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	NAP1L4	Q99733	375 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	ASIC3	Q9UHC3	531 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	HDAC9	Q9UKV0	1011 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208		B4DLN1	442 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	KCNJ6	P48051	423 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	MRPL12	P52815	198 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	NELFCD	Q8IXH7	590 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	RPGR	Q92834	1020 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	KRT12	Q99456	494 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	EPB41L5	Q9HCM4	733 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	CTTNBP2NL	Q9P2B4	639 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	AMFR	Q9UKV5	643 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	FRMD4B	Q9Y2L6	1034 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	SPDYE3	A6NKU9	549 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	PDE8A	O60658	829 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	E2F5	Q15329	346 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	MEX3C	Q5U5Q3	659 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	ARHGEF25	Q86VW2	580 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	RNF10	Q8N5U6	811 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	CCDC63	Q8NA47	563 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	ARHGEF2	Q92974	986 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	LSM14B	Q9BX40	385 aa	Known RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	MRFAP1	Q9Y605	127 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	FAM169A	Q9Y6X4	670 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	FMNL1	O95466	1100 aa	Predicted RBP	11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	PPP2R5E	Q16537	467 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	CCDC105	Q8IYK2	499 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	TBC1D31	Q96DN5	1066 aa		11.74	□□□□□ -0.53
MEIS2-222	ENST00000561208	TNKS	O95271	1327 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	CFAP65	Q6ZU64	1925 aa	Known RBP	11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	EHHADH	Q08426	723 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	ZNF365	Q70YC5	407 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	SRL	Q86TD4	932 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	BLID	Q8IZY5	108 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	MGARP	Q8TDB4	240 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	AIFM3	Q96NN9	605 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	NLRP3	Q96P20	1036 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	DPH5	Q9H2P9	285 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	PARP2	Q9UGN5	583 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	LONP1	P36776	959 aa	Known RBP	11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	RASSF7	Q02833	373 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	CEP128	Q6ZU80	1094 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	CNOT6L	Q96LI5	555 aa	Known RBP	11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	TBC1D7	Q9P0N9	293 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	CALU	O43852	315 aa	Predicted RBP	11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	ZNF131	P52739	623 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	MCUR1	Q96AQ8	359 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208	KLHL14	Q9P2G3	628 aa		11.73	□□□□□ -0.53
MEIS2-222	ENST00000561208		M0R2C6	588 aa		11.72	□□□□□ -0.53
MEIS2-222	ENST00000561208	MMP1	P03956	469 aa		11.72	□□□□□ -0.53
MEIS2-222	ENST00000561208	RPSA	P08865	295 aa	Known RBP	11.72	□□□□□ -0.53
MEIS2-222	ENST00000561208	PEX19	P40855	299 aa		11.72	□□□□□ -0.53
MEIS2-222	ENST00000561208	TRAF1	Q13077	416 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms