RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 LRRC3Q9BY71 257 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 ATP13A1Q9HD20 1204 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 METTL5Q9NRN9 209 aaKnown RBP6.17□□□□□ -1.42
TMOD3-207ENST00000560549 GGT7Q9UJ14 662 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 HECW1Q76N89 1606 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 PLB1Q6P1J6 1458 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 ZNF644Q9H582 1327 aaPredicted RBP6.16□□□□□ -1.42
TMOD3-207ENST00000560549 H3BS24 57 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 ZNF76P36508 570 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 HS2ST1Q7LGA3 356 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 NT5DC4Q86YG4 428 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 CYB5D2Q8WUJ1 264 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 ZNF296Q8WUU4 475 aaPredicted RBP6.16□□□□□ -1.42
TMOD3-207ENST00000560549 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 UBP1Q9NZI7 540 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 UHRF1BP1LA0JNW5 1464 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 TCOF1Q13428 1488 aaKnown RBP6.16□□□□□ -1.42
TMOD3-207ENST00000560549 UACAQ9BZF9 1416 aa6.16□□□□□ -1.42
TMOD3-207ENST00000560549 SLFN12Q8IYM2 578 aa6.15□□□□□ -1.42
TMOD3-207ENST00000560549 RRP7BPQ9NSQ0 103 aa6.15□□□□□ -1.42
TMOD3-207ENST00000560549 ABCC2Q92887 1545 aa6.15□□□□□ -1.42
TMOD3-207ENST00000560549 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.43
TMOD3-207ENST00000560549 IKZF1Q13422 519 aa6.15□□□□□ -1.43
TMOD3-207ENST00000560549 ZNF394Q53GI3 561 aa6.15□□□□□ -1.43
TMOD3-207ENST00000560549 BAHD1Q8TBE0 780 aaPredicted RBP6.15□□□□□ -1.43
TMOD3-207ENST00000560549 RNF34Q969K3 372 aa6.15□□□□□ -1.43
TMOD3-207ENST00000560549 COX4I2Q96KJ9 171 aa6.15□□□□□ -1.43
TMOD3-207ENST00000560549 CEP131Q9UPN4 1083 aa6.15□□□□□ -1.43
TMOD3-207ENST00000560549 SUPT16HQ9Y5B9 1047 aaKnown RBP6.15□□□□□ -1.43
TMOD3-207ENST00000560549 PCDHGB7Q9Y5F8 929 aa6.15□□□□□ -1.43
TMOD3-207ENST00000560549 NAIPQ13075 1403 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 SUPT6HQ7KZ85 1726 aaKnown RBP6.14□□□□□ -1.43
TMOD3-207ENST00000560549 RAPGEF6Q8TEU7 1601 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 PTPN23Q9H3S7 1636 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 LRRN2O75325 713 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 ZP2Q05996 745 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 ZNF746Q6NUN9 644 aaPredicted RBP6.14□□□□□ -1.43
TMOD3-207ENST00000560549 EAF1Q96JC9 268 aaPredicted RBP6.14□□□□□ -1.43
TMOD3-207ENST00000560549 BCL11AQ9H165 835 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 PCDHB14Q9Y5E9 798 aa6.14□□□□□ -1.43
TMOD3-207ENST00000560549 HFM1A2PYH4 1435 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 ABCA8O94911 1581 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 BTBD11A6QL63 1104 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 FAM155AB1AL88 458 aaPredicted RBP6.13□□□□□ -1.43
TMOD3-207ENST00000560549 ERCC5P28715 1186 aaPredicted RBP6.13□□□□□ -1.43
TMOD3-207ENST00000560549 CLCQ05315 142 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 THAP5Q7Z6K1 395 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 FAM177A1Q8N128 213 aaPredicted RBP6.13□□□□□ -1.43
TMOD3-207ENST00000560549 TMEM40Q8WWA1 233 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 DUSP15Q9H1R2 295 aaPredicted RBP6.13□□□□□ -1.43
TMOD3-207ENST00000560549 ANTXR1Q9H6X2 564 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 CARS2Q9HA77 564 aaKnown RBP6.13□□□□□ -1.43
TMOD3-207ENST00000560549 DDX41Q9UJV9 622 aaKnown RBP6.13□□□□□ -1.43
TMOD3-207ENST00000560549 CTNND2Q9UQB3 1225 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 KDM5BQ9UGL1 1544 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 MIA2Q96PC5 1412 aa6.13□□□□□ -1.43
TMOD3-207ENST00000560549 KIF13AQ9H1H9 1805 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 SLC22A31A6NKX4 558 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 EIF5BO60841 1220 aaKnown RBP6.12□□□□□ -1.43
TMOD3-207ENST00000560549 C8AP07357 584 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 POLR2BP30876 1174 aaKnown RBP6.12□□□□□ -1.43
TMOD3-207ENST00000560549 KIR3DL1P43629 444 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 SEZ6Q53EL9 994 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 OVOS1Q6IE37 1185 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 DTWD2Q8NBA8 298 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 FAM168AQ92567 244 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 UBE2FQ969M7 185 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 VWCEQ96DN2 955 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 C8orf37Q96NL8 207 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 KIF2CQ99661 725 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 TINF2Q9BSI4 451 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 ACBD3Q9H3P7 528 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 ATP10BO94823 1461 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 ADGRL1O94910 1474 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 ABCC5O15440 1437 aa6.12□□□□□ -1.43
TMOD3-207ENST00000560549 TROQ12816 1431 aaPredicted RBP6.12□□□□□ -1.43
TMOD3-207ENST00000560549 ZCCHC11Q5TAX3 1644 aaKnown RBP6.12□□□□□ -1.43
TMOD3-207ENST00000560549 ABCC10Q5T3U5 1492 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 UBOX5O94941 541 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 ATE1O95260 518 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 ESR1P03372 595 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 SRFP11831 508 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 ETV3P41162 512 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 TNNI2P48788 182 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 YARSP54577 528 aaKnown RBP6.11□□□□□ -1.43
TMOD3-207ENST00000560549 CWF19L2Q2TBE0 894 aaKnown RBP6.11□□□□□ -1.43
TMOD3-207ENST00000560549 TGIF2Q9GZN2 237 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 ZSWIM5Q9P217 1185 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 ROBO2Q9HCK4 1378 aa6.11□□□□□ -1.43
TMOD3-207ENST00000560549 DENND4BO75064 1496 aaPredicted RBP6.1□□□□□ -1.43
TMOD3-207ENST00000560549 KDM6BO15054 1643 aa6.1□□□□□ -1.43
TMOD3-207ENST00000560549 SHISA3A0PJX4 238 aa6.1□□□□□ -1.43
TMOD3-207ENST00000560549 CYP7A1P22680 504 aa6.1□□□□□ -1.43
TMOD3-207ENST00000560549 ZC3H6P61129 1189 aaKnown RBP6.1□□□□□ -1.43
TMOD3-207ENST00000560549 ARSHQ5FYA8 562 aa6.1□□□□□ -1.43
TMOD3-207ENST00000560549 PIWIL2Q8TC59 973 aaKnown RBP6.1□□□□□ -1.43
TMOD3-207ENST00000560549 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms