RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 ANKRD1Q15327 319 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 CCL15Q16663 113 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 ME3Q16798 604 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 SLC35G1Q2M3R5 365 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 FAM83BQ5T0W9 1011 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 TMTC2Q8N394 836 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 CHMP4CQ96CF2 233 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 PTPN18Q99952 460 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
RORA-212ENST00000560004 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 MTMR7Q9Y216 660 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
RORA-212ENST00000560004 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
RORA-212ENST00000560004 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
RORA-212ENST00000560004 ZBTB43O43298 467 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 ST18O60284 1047 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 CDC27P30260 824 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 SLC1A4P43007 532 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 VEGFBP49765 207 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 SCRN1Q12765 414 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 GADL1Q6ZQY3 521 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
RORA-212ENST00000560004 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 ZNF274Q96GC6 653 aaPredicted RBP13.35□□□□□ -0.27
RORA-212ENST00000560004 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 TMOD4Q9NZQ9 345 aa13.35□□□□□ -0.27
RORA-212ENST00000560004 WDR33Q9C0J8 1336 aaKnown RBP13.35□□□□□ -0.27
RORA-212ENST00000560004 MANSC4A6NHS7 340 aaPredicted RBP13.34□□□□□ -0.27
RORA-212ENST00000560004 GOLGA8AA7E2F4 631 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 PLEKHA8P1O95397 391 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 GOLGA8HP0CJ92 632 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 CETPP11597 493 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 BMP3P12645 472 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
RORA-212ENST00000560004 GRM1Q13255 1194 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 TTBK2Q6IQ55 1244 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
RORA-212ENST00000560004 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 MYH6P13533 1939 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 CNTNAP5Q8WYK1 1306 aa13.34□□□□□ -0.27
RORA-212ENST00000560004 RAD21O60216 631 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 PFKFB2O60825 505 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 CALM1P0DP23 149 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 CALM2P0DP24 149 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 CALM3P0DP25 149 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 KIF23Q02241 960 aaPredicted RBP13.33□□□□□ -0.28
RORA-212ENST00000560004 FUT2Q10981 343 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 STK3Q13188 491 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 NOGQ13253 232 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 RTN1Q16799 776 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.28
RORA-212ENST00000560004 POTEEQ6S8J3 1075 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 FASTKD5Q7L8L6 764 aaKnown RBP13.33□□□□□ -0.28
RORA-212ENST00000560004 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 GTF3C6Q969F1 213 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 SNX21Q969T3 373 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 LIMCH1Q9UPQ0 1083 aa13.33□□□□□ -0.28
RORA-212ENST00000560004 CYTH3O43739 400 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 NTRK3Q16288 839 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 FANCBQ8NB91 859 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 CTCFLQ8NI51 663 aaPredicted RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 TANGO6Q9C0B7 1094 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 NAP1L2Q9ULW6 460 aaPredicted RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 ADGRA2Q96PE1 1338 aa13.32□□□□□ -0.28
RORA-212ENST00000560004 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
RORA-212ENST00000560004 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
RORA-212ENST00000560004 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
RORA-212ENST00000560004 USP17L15C9J2P7 530 aa13.31□□□□□ -0.28
RORA-212ENST00000560004 USP17L13C9JLJ4 530 aa13.31□□□□□ -0.28
RORA-212ENST00000560004 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
RORA-212ENST00000560004 USP17L11C9JVI0 530 aa13.31□□□□□ -0.28
RORA-212ENST00000560004 USP17L18D6R9N7 530 aa13.31□□□□□ -0.28
RORA-212ENST00000560004 USP17L22D6RA61 530 aa13.31□□□□□ -0.28
RORA-212ENST00000560004 USP17L17D6RBQ6 530 aa13.31□□□□□ -0.28
RORA-212ENST00000560004 USP17L19D6RCP7 530 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms