RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 AKAP17AQ02040 695 aaKnown RBP14.13□□□□□ -0.15
HERC1-205ENST00000559886 ALG1Q9BT22 464 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 GOPCQ9HD26 462 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 PICK1Q9NRD5 415 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 FRMPD2Q68DX3 1309 aaPredicted RBP14.13□□□□□ -0.15
HERC1-205ENST00000559886 ZSCAN22P10073 491 aaPredicted RBP14.13□□□□□ -0.15
HERC1-205ENST00000559886 PTPRAP18433 802 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 SLC1A4P43007 532 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 MAP3K9P80192 1104 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 PKN1Q16512 942 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.13□□□□□ -0.15
HERC1-205ENST00000559886 ZNF526Q8TF50 670 aaPredicted RBP14.13□□□□□ -0.15
HERC1-205ENST00000559886 AIFM3Q96NN9 605 aa14.13□□□□□ -0.15
HERC1-205ENST00000559886 RBM27Q9P2N5 1060 aaKnown RBP14.13□□□□□ -0.15
HERC1-205ENST00000559886 VPS37CA5D8V6 355 aaPredicted RBP14.12□□□□□ -0.15
HERC1-205ENST00000559886 MAP3K11Q16584 847 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 CCDC96Q2M329 555 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 FBXO18Q8NFZ0 1043 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 C8orf76Q96K31 380 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 VCPKMTQ9H867 229 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 GPCPD1Q9NPB8 672 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 H3BQV1 296 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 RAD21O60216 631 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 IREB2P48200 963 aaKnown RBP14.12□□□□□ -0.15
HERC1-205ENST00000559886 KIAA1755Q5JYT7 1200 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 IFFO2Q5TF58 517 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 KCTD1Q719H9 257 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
HERC1-205ENST00000559886 KIAA1683Q9H0B3 1180 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 CPVLQ9H3G5 476 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 RIOX1Q9H6W3 641 aa14.12□□□□□ -0.15
HERC1-205ENST00000559886 hCG_1642624A0A1W2PR95 340 aa14.11□□□□□ -0.15
HERC1-205ENST00000559886 VGLL4Q14135 290 aa14.11□□□□□ -0.15
HERC1-205ENST00000559886 UBA5Q9GZZ9 404 aa14.11□□□□□ -0.15
HERC1-205ENST00000559886 AS3MTQ9HBK9 375 aa14.11□□□□□ -0.15
HERC1-205ENST00000559886 BMP3P12645 472 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 FOSBP53539 338 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 FOXD4L5Q5VV16 416 aaPredicted RBP14.1□□□□□ -0.15
HERC1-205ENST00000559886 TTBK2Q6IQ55 1244 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 FOXD4L4Q8WXT5 416 aaPredicted RBP14.1□□□□□ -0.15
HERC1-205ENST00000559886 FEZ1Q99689 392 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 GJB4Q9NTQ9 266 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 SNCAIPQ9Y6H5 919 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 TRAF5O00463 557 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 F13A1P00488 732 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 PFKFB3Q16875 520 aaPredicted RBP14.1□□□□□ -0.15
HERC1-205ENST00000559886 SPICE1Q8N0Z3 855 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 ZNF280CQ8ND82 737 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 NUP88Q99567 741 aaPredicted RBP14.1□□□□□ -0.15
HERC1-205ENST00000559886 CSADQ9Y600 493 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 ZHX2Q9Y6X8 837 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 TCHHQ07283 1943 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 PTPRFP10586 1907 aa14.1□□□□□ -0.15
HERC1-205ENST00000559886 USP17L10C9JJH3 530 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 SCG2P13521 617 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 GUCY1B3Q02153 619 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 SPP2Q13103 211 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 ZYXQ15942 572 aaKnown RBP14.09□□□□□ -0.15
HERC1-205ENST00000559886 OTUD7BQ6GQQ9 843 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 ANKRD13AQ8IZ07 590 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 TRIM29Q14134 588 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 KRT40Q6A162 431 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 BTNL9Q6UXG8 535 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 CLEC17AQ6ZS10 378 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 ARMC9Q7Z3E5 817 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 ADGRF4Q8IZF3 695 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 PIBF1Q8WXW3 757 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 LPAR1Q92633 364 aa14.09□□□□□ -0.15
HERC1-205ENST00000559886 RRP36Q96EU6 259 aaKnown RBP14.09□□□□□ -0.15
HERC1-205ENST00000559886 MYH15Q9Y2K3 1946 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 SLC16A2P36021 539 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 USP14P54578 494 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 BACE1P56817 501 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 MTMR2Q13614 643 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 TTLL12Q14166 644 aaPredicted RBP14.08□□□□□ -0.15
HERC1-205ENST00000559886 MOB2Q70IA6 237 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 MTMR8Q96EF0 704 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 JMJD4Q9H9V9 463 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 VAT1LQ9HCJ6 419 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 ISY1Q9ULR0 285 aaKnown RBP14.08□□□□□ -0.15
HERC1-205ENST00000559886 AFG3L2Q9Y4W6 797 aa14.08□□□□□ -0.15
HERC1-205ENST00000559886 TRPM7Q96QT4 1865 aa14.08□□□□□ -0.16
HERC1-205ENST00000559886 TMEM232C9JQI7 657 aa14.08□□□□□ -0.16
HERC1-205ENST00000559886 XBP1P17861 261 aa14.08□□□□□ -0.16
HERC1-205ENST00000559886 FMR1Q06787 632 aaKnown RBP eCLIP14.08□□□□□ -0.16
HERC1-205ENST00000559886 FAM83BQ5T0W9 1011 aa14.08□□□□□ -0.16
HERC1-205ENST00000559886 PIGSQ96S52 555 aa14.08□□□□□ -0.16
HERC1-205ENST00000559886 PLA2G6O60733 806 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 LDLRAD1Q5T700 205 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 FERMT3Q86UX7 667 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 SHISA4Q96DD7 197 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 EMILIN3Q9NT22 766 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 SEC63Q9UGP8 760 aaKnown RBP14.07□□□□□ -0.16
HERC1-205ENST00000559886 C19orf81C9J6K1 198 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 WDR46O15213 610 aaKnown RBP14.07□□□□□ -0.16
HERC1-205ENST00000559886 CHADLQ6NUI6 762 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 HOMER1Q86YM7 354 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 ZSCAN16Q9H4T2 348 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms