RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 RGS22Q8NE09 1264 aa16.55■□□□□ 0.24
RABGGTA-209ENST00000559551 SPZ1Q9BXG8 430 aa16.55■□□□□ 0.24
RABGGTA-209ENST00000559551 ADM5C9JUS6 153 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 PFKFB3Q16875 520 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 RIOX1Q9H6W3 641 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 GPCPD1Q9NPB8 672 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 ZNF112Q9UJU3 913 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 EPHX2P34913 555 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 GNAQP50148 359 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 WASF1Q92558 559 aa16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.54■□□□□ 0.24
RABGGTA-209ENST00000559551 F5H6K3 240 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 NDUFB10O96000 172 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 MMP1P03956 469 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 SCG2P13521 617 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 KLRC3Q07444 240 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 ASPRV1Q53RT3 343 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 SLFN13Q68D06 897 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 GMCL1P1Q8NEA9 526 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 OXER1Q8TDS5 423 aa16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 GPKOWQ92917 476 aaPredicted RBP eCLIP16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 ZSCAN16Q9H4T2 348 aaPredicted RBP16.53■□□□□ 0.24
RABGGTA-209ENST00000559551 PARP14Q460N5 1801 aa16.52■□□□□ 0.24
RABGGTA-209ENST00000559551 PPP4R3BQ5MIZ7 849 aa16.52■□□□□ 0.24
RABGGTA-209ENST00000559551 PHF20Q9BVI0 1012 aa16.52■□□□□ 0.24
RABGGTA-209ENST00000559551 TAF1DQ9H5J8 278 aaPredicted RBP16.52■□□□□ 0.24
RABGGTA-209ENST00000559551 TFIP11Q9UBB9 837 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-209ENST00000559551 TMX2Q9Y320 296 aa16.52■□□□□ 0.24
RABGGTA-209ENST00000559551 PPP2R3BQ9Y5P8 575 aa16.52■□□□□ 0.24
RABGGTA-209ENST00000559551 DDX11L8A8MPP1 907 aa16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 BTBD18B2RXH4 712 aa16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 SMARCA1P28370 1054 aa16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 SLC16A2P36021 539 aa16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 AKAP17AQ02040 695 aaKnown RBP16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 PIGSQ96S52 555 aa16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 LZTS2Q9BRK4 669 aa16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 PTPRFP10586 1907 aa16.52■□□□□ 0.23
RABGGTA-209ENST00000559551 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 ASNSP08243 561 aa16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■□□ 16.9
RABGGTA-209ENST00000559551 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 USP50Q70EL3 339 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 ZKSCAN4Q969J2 545 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 ATP6V1DQ9Y5K8 247 aa16.51■□□□□ 0.23
RABGGTA-209ENST00000559551 FIBPO43427 364 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 POTEJP0CG39 1038 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 NR5A1Q13285 461 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 NOM1Q5C9Z4 860 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 DIS3L2Q8IYB7 885 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 RAD21O60216 631 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 PPP1R11O60927 126 aaPredicted RBP16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 DGKZQ13574 1117 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 EARS2Q5JPH6 523 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 ADGRF4Q8IZF3 695 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 MTMR8Q96EF0 704 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
RABGGTA-209ENST00000559551 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 USP17L10C9JJH3 530 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 USP2O75604 605 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 NCLP19338 710 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 SLC1A4P43007 532 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 MYSM1Q5VVJ2 828 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 DCAF15Q66K64 600 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 HOMER1Q86YM7 354 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 TNFRSF25Q93038 417 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 DCPSQ96C86 337 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 ARHGEF10LQ9HCE6 1279 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 RLFQ13129 1914 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 STXBP3O00186 592 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 TRIM29Q14134 588 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
RABGGTA-209ENST00000559551 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
RABGGTA-209ENST00000559551 PRKG1Q13976 671 aa16.48■□□□□ 0.23
RABGGTA-209ENST00000559551 ZYXQ15942 572 aaKnown RBP16.48■□□□□ 0.23
RABGGTA-209ENST00000559551 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
RABGGTA-209ENST00000559551 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
RABGGTA-209ENST00000559551 BARHL2Q9NY43 387 aa16.48■□□□□ 0.23
RABGGTA-209ENST00000559551 RBM27Q9P2N5 1060 aaKnown RBP16.48■□□□□ 0.23
RABGGTA-209ENST00000559551 TRAK2O60296 914 aa16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 KRT85P78386 507 aa16.47■□□□□ 0.23
RABGGTA-209ENST00000559551 BRAPQ7Z569 592 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms