RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 GRAPLQ8TC17 118 aaPredicted RBP21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 PAIP2Q9BPZ3 127 aaKnown RBP21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 CALCOCO1Q9P1Z2 691 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 CCDC93Q567U6 631 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 CSRNP1Q96S65 589 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 NPR1P16066 1061 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 TECP42680 631 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 YWHAEP62258 255 aaKnown RBP21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 ANKRD35Q8N283 1001 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 IFT81Q8WYA0 676 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 KIF22Q14807 665 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 GOLGA5Q8TBA6 731 aa21.79■■□□□ 1.08
IGDCC4-204ENST00000559327 M0R2C6 588 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 GTF2F1P35269 517 aaKnown RBP eCLIP21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 PNOCQ13519 176 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 FAM182BQ5T319 152 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 GPKOWQ92917 476 aaPredicted RBP eCLIP21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 RNF34Q969K3 372 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 FAM169AQ9Y6X4 670 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 P4HA1P13674 534 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 USP14P54578 494 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 UNC13BO14795 1591 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 TTLL1O95922 423 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 CCPG1Q9ULG6 757 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 AMNQ9BXJ7 453 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 ALKQ9UM73 1620 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 MYOCDQ8IZQ8 938 aa21.78■■□□□ 1.08
IGDCC4-204ENST00000559327 GLI2P10070 1586 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 PTPN12Q05209 780 aaKnown RBP21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 ZBTB8OSQ8IWT0 167 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 SECISBP2LQ93073 1101 aaKnown RBP21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 BSDC1Q9NW68 430 aaPredicted RBP21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 RNF17Q9BXT8 1623 aaKnown RBP21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 FAM102BQ5T8I3 360 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 DHX36Q9H2U1 1008 aaKnown RBP21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 PRPF6O94906 941 aaKnown RBP21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 CMA1P23946 247 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 SFMBT2Q5VUG0 894 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 PLA2G4DQ86XP0 818 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 CCDC63Q8NA47 563 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 STAMQ92783 540 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 MTMR6Q9Y217 621 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 PCDHA1Q9Y5I3 950 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 ADGRB3O60242 1522 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 TNS3Q68CZ2 1445 aa21.77■■□□□ 1.08
IGDCC4-204ENST00000559327 RPS6KA4O75676 772 aa21.77■■□□□ 1.07
IGDCC4-204ENST00000559327 USP28Q96RU2 1077 aa21.77■■□□□ 1.07
IGDCC4-204ENST00000559327 RHOXF2BP0C7M4 288 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 ERCC5P28715 1186 aaPredicted RBP21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 GPR161Q8N6U8 529 aaKnown RBP21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 RHOXF2Q9BQY4 288 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 TRPC6Q9Y210 931 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 KRT19P08727 400 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 LONP1P36776 959 aaKnown RBP21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 KLHL30Q0D2K2 578 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 RNF26Q9BY78 433 aaPredicted RBP21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 ARL1P40616 181 aaPredicted RBP21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 DBNDD1Q9H9R9 158 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 NCAPG2Q86XI2 1143 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 TRIML1Q8N9V2 468 aa21.76■■□□□ 1.07
IGDCC4-204ENST00000559327 hCG_1984214I3L0E3 225 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 SUPT20HL1Q3ZLR7 823 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 ZNF713Q8N859 430 aaPredicted RBP21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 KIAA1468Q9P260 1216 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 LAD1O00515 517 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 ARHGAP6O43182 974 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 SCRN1Q12765 414 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 CLUL1Q15846 466 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 CCDC25Q86WR0 208 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 KANSL2Q9H9L4 492 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 CTTNBP2NLQ9P2B4 639 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 CLRN2A0PK11 232 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 SUSD4Q5VX71 490 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 H7C1W4 665 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 TNNI1P19237 187 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 SPHKAPQ2M3C7 1700 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 DYNLL1P63167 89 aaKnown RBP21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 SYCE1Q8N0S2 351 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 FAM204AQ9H8W3 233 aa21.75■■□□□ 1.07
IGDCC4-204ENST00000559327 BTBD18B2RXH4 712 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 TRAPPC10P48553 1259 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 TERF1P54274 439 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 KCNQ4P56696 695 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 XKR9Q5GH70 373 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 ARFGAP2Q8N6H7 521 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 MAGEF1Q9HAY2 307 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 SRP68Q9UHB9 627 aaKnown RBP21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 CYP27B1O15528 508 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 FMNL1O95466 1100 aaPredicted RBP21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 RTKN2Q8IZC4 609 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 SELENOSQ9BQE4 189 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 MAGEA1P43355 309 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 NT5C2P49902 561 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 PPP2R3AQ06190 1150 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 POLA2Q14181 598 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 CFAP58Q5T655 872 aa21.74■■□□□ 1.07
IGDCC4-204ENST00000559327 TULP4Q9NRJ4 1543 aa21.73■■□□□ 1.07
IGDCC4-204ENST00000559327 GTPBP6O43824 516 aaPredicted RBP21.73■■□□□ 1.07
IGDCC4-204ENST00000559327 XRCC5P13010 732 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms