RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 ISL2Q96A47 359 aa7.13□□□□□ -1.27
CASC4-207ENST00000559037 RSRP1Q9BUV0 290 aa7.13□□□□□ -1.27
CASC4-207ENST00000559037 ADGRB1O14514 1584 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 DLC1Q96QB1 1528 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 PNPLA6Q8IY17 1366 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 HYAL3O43820 417 aaPredicted RBP7.12□□□□□ -1.27
CASC4-207ENST00000559037 NEFMP07197 916 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 TAGLNQ01995 201 aaKnown RBP7.12□□□□□ -1.27
CASC4-207ENST00000559037 TSNAXIP1Q2TAA8 658 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 CDC37L1Q7L3B6 337 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.12□□□□□ -1.27
CASC4-207ENST00000559037 ZNF507Q8TCN5 953 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 SSU72Q9NP77 194 aaKnown RBP7.12□□□□□ -1.27
CASC4-207ENST00000559037 PCMTD2Q9NV79 361 aa7.12□□□□□ -1.27
CASC4-207ENST00000559037 COL22A1Q8NFW1 1626 aaPredicted RBP7.12□□□□□ -1.27
CASC4-207ENST00000559037 RBM47A0AV96 593 aaKnown RBP7.11□□□□□ -1.27
CASC4-207ENST00000559037 DCDC2CA8MYV0 355 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 ZNF16P17020 682 aaPredicted RBP7.11□□□□□ -1.27
CASC4-207ENST00000559037 ADMP35318 185 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 CAP2P40123 477 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 ZNF772Q68DY9 489 aaPredicted RBP7.11□□□□□ -1.27
CASC4-207ENST00000559037 MPRIPQ6WCQ1 1025 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 CYFIP1Q7L576 1253 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 DTX1Q86Y01 620 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 PHC3Q8NDX5 983 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 USP32Q8NFA0 1604 aa7.11□□□□□ -1.27
CASC4-207ENST00000559037 ARHGEF28Q8N1W1 1705 aaKnown RBP7.1□□□□□ -1.27
CASC4-207ENST00000559037 KIF1AQ12756 1690 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 NPHP3Q7Z494 1330 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 CYP26A1O43174 497 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 DYNC1LI2O43237 492 aaPredicted RBP7.1□□□□□ -1.27
CASC4-207ENST00000559037 SPINK2P20155 84 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 NTF4P34130 210 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 LMNB2Q03252 620 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 PPM1JQ5JR12 505 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 WIPI1Q5MNZ9 446 aaPredicted RBP7.1□□□□□ -1.27
CASC4-207ENST00000559037 LRFN4Q6PJG9 635 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 RELL1Q8IUW5 271 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 PLPPR2Q96GM1 343 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 PSMG3-AS1Q96PY0 264 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 PRAM1Q96QH2 718 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 MKNK2Q9HBH9 465 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 PXDNQ92626 1479 aa7.1□□□□□ -1.27
CASC4-207ENST00000559037 FAM170BA6NMN3 283 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 TFE3P19532 575 aaPredicted RBP7.09□□□□□ -1.27
CASC4-207ENST00000559037 SSTR4P31391 388 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 RPL6Q02878 288 aaKnown RBP7.09□□□□□ -1.27
CASC4-207ENST00000559037 MAP3K11Q16584 847 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 MEX3CQ5U5Q3 659 aaKnown RBP7.09□□□□□ -1.27
CASC4-207ENST00000559037 ZNF765Q7L2R6 523 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 TMEM74Q96NL1 305 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 WNT10AQ9GZT5 417 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 POGKQ9P215 609 aa7.09□□□□□ -1.27
CASC4-207ENST00000559037 ADGRB2O60241 1585 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 AFF2P51816 1311 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 PRAMEF27A3QJZ7 478 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 LRIG2O94898 1065 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 FAM87AP0C7U9 286 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 PTPN11Q06124 597 aaPredicted RBP7.08□□□□□ -1.28
CASC4-207ENST00000559037 PDE4BQ07343 736 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 SEPT6Q14141 434 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 SAFB2Q14151 953 aaKnown RBP eCLIP7.08□□□□□ -1.28
CASC4-207ENST00000559037 INPP5AQ14642 412 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 HS2ST1Q7LGA3 356 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 KRT28Q7Z3Y7 464 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 RHOVQ96L33 236 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 DUSP23Q9BVJ7 150 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 PCDHB5Q9Y5E4 795 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 CSADQ9Y600 493 aa7.08□□□□□ -1.28
CASC4-207ENST00000559037 SPATA31A3Q5VYP0 1347 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 GFRA2O00451 464 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 BPNT1O95861 308 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 PRNPP04156 253 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 VAMP1P23763 118 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 ETF1P62495 437 aaKnown RBP7.07□□□□□ -1.28
CASC4-207ENST00000559037 CDK5R2Q13319 367 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 ERMP1Q7Z2K6 904 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 HID1Q8IV36 788 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 BSDC1Q9NW68 430 aaPredicted RBP7.07□□□□□ -1.28
CASC4-207ENST00000559037 ADAM30Q9UKF2 790 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 ITSN1Q15811 1721 aa7.07□□□□□ -1.28
CASC4-207ENST00000559037 TRPM3Q9HCF6 1732 aaPredicted RBP7.07□□□□□ -1.28
CASC4-207ENST00000559037 PRR36Q9H6K5 1346 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 GBP2P32456 591 aaPredicted RBP7.06□□□□□ -1.28
CASC4-207ENST00000559037 CAMK2GQ13555 558 aaPredicted RBP7.06□□□□□ -1.28
CASC4-207ENST00000559037 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
CASC4-207ENST00000559037 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.06□□□□□ -1.28
CASC4-207ENST00000559037 VSIG10LQ86VR7 867 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 MFSD2AQ8NA29 543 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 GATAD2BQ8WXI9 593 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 MISP3Q96FF7 219 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 C8orf37Q96NL8 207 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 SIN3AQ96ST3 1273 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 LGR6Q9HBX8 967 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 PRDM10Q9NQV6 1147 aa7.06□□□□□ -1.28
CASC4-207ENST00000559037 METTL5Q9NRN9 209 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms