RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PTPDC1A2A3K4 754 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 SPDYE5A6NIY4 337 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 KLRF2D3W0D1 207 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 TOMM70O94826 608 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 BACE1P56817 501 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 PPATQ06203 517 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 MTMR2Q13614 643 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 ZYXQ15942 572 aaKnown RBP21.02■□□□□ 0.96
CLPX-203ENST00000558958 ERO1BQ86YB8 467 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 CMTR1Q8N1G2 835 aaKnown RBP21.02■□□□□ 0.96
CLPX-203ENST00000558958 SRBD1Q8N5C6 995 aaKnown RBP21.02■□□□□ 0.96
CLPX-203ENST00000558958 CNKSR2Q8WXI2 1034 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 LZTS2Q9BRK4 669 aa21.02■□□□□ 0.96
CLPX-203ENST00000558958 TRIM75PA6NK02 468 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 GJB2P29033 226 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 USP14P54578 494 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 HMGN5P82970 282 aaKnown RBP21.01■□□□□ 0.95
CLPX-203ENST00000558958 NBPF11Q86T75 865 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 SPICE1Q8N0Z3 855 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 CCDC82Q8N4S0 544 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 TRPM7Q96QT4 1865 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 CWC22Q9HCG8 908 aaKnown RBP21.01■□□□□ 0.95
CLPX-203ENST00000558958 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.01■□□□□ 0.95
CLPX-203ENST00000558958 FRMPD2Q68DX3 1309 aaPredicted RBP21.01■□□□□ 0.95
CLPX-203ENST00000558958 C19orf81C9J6K1 198 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 PPFIA3O75145 1194 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 SMARCA1P28370 1054 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 CCDC96Q2M329 555 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 KCTD1Q719H9 257 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 LPAR1Q92633 364 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 PHKBQ93100 1093 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 NUP88Q99567 741 aaPredicted RBP21.01■□□□□ 0.95
CLPX-203ENST00000558958 GPCPD1Q9NPB8 672 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 EMILIN3Q9NT22 766 aa21.01■□□□□ 0.95
CLPX-203ENST00000558958 BMP3P12645 472 aa21■□□□□ 0.95
CLPX-203ENST00000558958 FDPSP14324 419 aaKnown RBP21■□□□□ 0.95
CLPX-203ENST00000558958 SLC35G1Q2M3R5 365 aa21■□□□□ 0.95
CLPX-203ENST00000558958 SLC10A4Q96EP9 437 aa21■□□□□ 0.95
CLPX-203ENST00000558958 OTUD5Q96G74 571 aa21■□□□□ 0.95
CLPX-203ENST00000558958 SPZ1Q9BXG8 430 aa21■□□□□ 0.95
CLPX-203ENST00000558958 FMNL1O95466 1100 aaPredicted RBP20.99■□□□□ 0.95
CLPX-203ENST00000558958 DDIT3P35638 169 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 SSRP1Q08945 709 aaKnown RBP20.99■□□□□ 0.95
CLPX-203ENST00000558958 PPIL2Q13356 520 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 TTBK2Q6IQ55 1244 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 OPTNQ96CV9 577 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 C12orf42Q96LP6 360 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 SLC26A6Q9BXS9 759 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 RNF26Q9BY78 433 aaPredicted RBP20.99■□□□□ 0.95
CLPX-203ENST00000558958 ORC3Q9UBD5 711 aaPredicted RBP20.99■□□□□ 0.95
CLPX-203ENST00000558958 CNTNAP5Q8WYK1 1306 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 STK36Q9NRP7 1315 aa20.99■□□□□ 0.95
CLPX-203ENST00000558958 IRF6O14896 467 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 CYTH3O43739 400 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 HMGCS2P54868 508 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 DGKZQ13574 1117 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 SH3D19Q5HYK7 790 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 FAM83BQ5T0W9 1011 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 TRIM22Q8IYM9 498 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 UBA5Q9GZZ9 404 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 CPVLQ9H3G5 476 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 KCNH4Q9UQ05 1017 aa20.98■□□□□ 0.95
CLPX-203ENST00000558958 TMEM232C9JQI7 657 aa20.97■□□□□ 0.95
CLPX-203ENST00000558958 CXCL11O14625 94 aa20.97■□□□□ 0.95
CLPX-203ENST00000558958 WDR46O15213 610 aaKnown RBP20.97■□□□□ 0.95
CLPX-203ENST00000558958 PRPF3O43395 683 aaKnown RBP20.97■□□□□ 0.95
CLPX-203ENST00000558958 FSTL1Q12841 308 aa20.97■□□□□ 0.95
CLPX-203ENST00000558958 RIOX1Q9H6W3 641 aa20.97■□□□□ 0.95
CLPX-203ENST00000558958 ISY1Q9ULR0 285 aaKnown RBP20.97■□□□□ 0.95
CLPX-203ENST00000558958 V9GY48 417 aaPredicted RBP20.97■□□□□ 0.95
CLPX-203ENST00000558958 VCAM1P19320 739 aa20.96■□□□□ 0.95
CLPX-203ENST00000558958 SLC16A2P36021 539 aa20.96■□□□□ 0.95
CLPX-203ENST00000558958 GJA5P36382 358 aa20.96■□□□□ 0.95
CLPX-203ENST00000558958 HUNKP57058 714 aa20.96■□□□□ 0.95
CLPX-203ENST00000558958 BTNL9Q6UXG8 535 aa20.96■□□□□ 0.95
CLPX-203ENST00000558958 A0A0G2JLL6 359 aaPredicted RBP20.95■□□□□ 0.94
CLPX-203ENST00000558958 PLA2G6O60733 806 aa20.95■□□□□ 0.94
CLPX-203ENST00000558958 DEXIO95424 95 aa20.95■□□□□ 0.94
CLPX-203ENST00000558958 AKAP17AQ02040 695 aaKnown RBP20.95■□□□□ 0.94
CLPX-203ENST00000558958 PRRT2Q7Z6L0 340 aaPredicted RBP20.95■□□□□ 0.94
CLPX-203ENST00000558958 FAM184AQ8NB25 1140 aa20.95■□□□□ 0.94
CLPX-203ENST00000558958 TMOD4Q9NZQ9 345 aa20.95■□□□□ 0.94
CLPX-203ENST00000558958 RBM27Q9P2N5 1060 aaKnown RBP20.95■□□□□ 0.94
CLPX-203ENST00000558958 KIF3AQ9Y496 699 aa20.95■□□□□ 0.94
CLPX-203ENST00000558958 STAT2P52630 851 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 SAPCD2Q86UD0 394 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 ADGRF4Q8IZF3 695 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 WNK4Q96J92 1243 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 FEM1BQ9UK73 627 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 BAZ2BQ9UIF8 2168 aaKnown RBP20.94■□□□□ 0.94
CLPX-203ENST00000558958 hCG_1642624A0A1W2PR95 340 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 PKN1Q16512 942 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 CHURC1Q8WUH1 139 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 WASF1Q92558 559 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 RPAP3Q9H6T3 665 aaPredicted RBP20.94■□□□□ 0.94
CLPX-203ENST00000558958 JMJD4Q9H9V9 463 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 VAT1LQ9HCJ6 419 aa20.94■□□□□ 0.94
CLPX-203ENST00000558958 PDCP20941 246 aa20.93■□□□□ 0.94
CLPX-203ENST00000558958 IKQ13123 557 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms