RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CTDSPL2Q05D32 466 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 KIAA1755Q5JYT7 1200 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 NACAP1Q9BZK3 213 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 TXNRD2Q9NNW7 524 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
TPM1-216ENST00000558910 USP17L15C9J2P7 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L13C9JLJ4 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L11C9JVI0 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L18D6R9N7 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L22D6RA61 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L17D6RBQ6 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L19D6RCP7 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L20D6RJB6 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 EVI5O60447 810 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 EEF2P13639 858 aaKnown RBP14.32□□□□□ -0.12
TPM1-216ENST00000558910 FLT3LGP49771 235 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 USP17L24Q0WX57 530 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 Q3C1V9 767 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 FAM47AQ5JRC9 791 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 NBPF11Q86T75 865 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 COA7Q96BR5 231 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 ARHGEF10LQ9HCE6 1279 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
TPM1-216ENST00000558910 EN2P19622 333 aaPredicted RBP14.31□□□□□ -0.12
TPM1-216ENST00000558910 GCLCP48506 637 aaPredicted RBP14.31□□□□□ -0.12
TPM1-216ENST00000558910 MTFR1Q15390 333 aa14.31□□□□□ -0.12
TPM1-216ENST00000558910 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
TPM1-216ENST00000558910 ZNF444Q8N0Y2 327 aaPredicted RBP14.31□□□□□ -0.12
TPM1-216ENST00000558910 GPRC5AQ8NFJ5 357 aa14.31□□□□□ -0.12
TPM1-216ENST00000558910 KIAA1683Q9H0B3 1180 aa14.31□□□□□ -0.12
TPM1-216ENST00000558910 MTMR7Q9Y216 660 aa14.31□□□□□ -0.12
TPM1-216ENST00000558910 LOC285556D6RIA3 1793 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 CYP2B6P20813 491 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 RASA1P20936 1047 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 HOXA7P31268 230 aaPredicted RBP14.3□□□□□ -0.12
TPM1-216ENST00000558910 GRK4P32298 578 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 SLC4A3P48751 1232 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 HAND2P61296 217 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 PPARAQ07869 468 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 PLS1Q14651 629 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 SBK1Q52WX2 424 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
TPM1-216ENST00000558910 CWC27Q6UX04 472 aaKnown RBP14.3□□□□□ -0.12
TPM1-216ENST00000558910 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
TPM1-216ENST00000558910 SIAH1Q8IUQ4 282 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 ZNF333Q96JL9 665 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 NUP88Q99567 741 aaPredicted RBP14.3□□□□□ -0.12
TPM1-216ENST00000558910 PORCNQ9H237 461 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 RBPJLQ9UBG7 517 aa14.3□□□□□ -0.12
TPM1-216ENST00000558910 ADCY3O60266 1144 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 FLOT1O75955 427 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 SDSP20132 328 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 PBX2P40425 430 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 ERVK-9P63128 1117 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 ERVK-24P63145 666 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 CAMK2BQ13554 666 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 MCMDC2Q4G0Z9 681 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 PPP4R3BQ5MIZ7 849 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 GIMAP6Q6P9H5 292 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 HELLSQ9NRZ9 838 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 CLIP2Q9UDT6 1046 aa14.29□□□□□ -0.12
TPM1-216ENST00000558910 GNRH1P01148 92 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
TPM1-216ENST00000558910 TSPY3P0CV98 308 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 TSPY8P0CW00 308 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 MYH8P13535 1937 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 LSM11P83369 360 aaKnown RBP eCLIP14.28□□□□□ -0.12
TPM1-216ENST00000558910 TFAP4Q01664 338 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 SKAP1Q86WV1 359 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 LRRC47Q8N1G4 583 aaKnown RBP14.28□□□□□ -0.12
TPM1-216ENST00000558910 ARMC5Q96C12 935 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 C12orf42Q96LP6 360 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.28□□□□□ -0.12
TPM1-216ENST00000558910 KANSL2Q9H9L4 492 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 FBXO28Q9NVF7 368 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
TPM1-216ENST00000558910 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.13
TPM1-216ENST00000558910 FOXP2O15409 715 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 CNMDO75829 334 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 PRMT2P55345 433 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 PDE4BQ07343 736 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 ATG4CQ96DT6 458 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 RNF208Q9H0X6 261 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 SH2D4AQ9H788 454 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 VCPKMTQ9H867 229 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 TMX2Q9Y320 296 aa14.27□□□□□ -0.13
TPM1-216ENST00000558910 KIAA0100Q14667 2235 aaKnown RBP14.26□□□□□ -0.13
TPM1-216ENST00000558910 RANBP6O60518 1105 aaKnown RBP14.26□□□□□ -0.13
TPM1-216ENST00000558910 NMT2O60551 498 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 INHAP05111 366 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 CCL5P13501 91 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 UBXN2AP68543 259 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 TRIM32Q13049 653 aa14.26□□□□□ -0.13
TPM1-216ENST00000558910 GPR142Q7Z601 462 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms