RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 CYB5R4Q7L1T6 521 aa12.24□□□□□ -0.45
PSMA4-207ENST00000558635 FASTKD5Q7L8L6 764 aaKnown RBP12.24□□□□□ -0.45
PSMA4-207ENST00000558635 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
PSMA4-207ENST00000558635 TMOD4Q9NZQ9 345 aa12.24□□□□□ -0.45
PSMA4-207ENST00000558635 STX8Q9UNK0 236 aa12.24□□□□□ -0.45
PSMA4-207ENST00000558635 TMX2Q9Y320 296 aa12.24□□□□□ -0.45
PSMA4-207ENST00000558635 SNX14Q9Y5W7 946 aa12.24□□□□□ -0.45
PSMA4-207ENST00000558635 PHIPQ8WWQ0 1821 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 MCCP23508 829 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 USP14P54578 494 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 COL9A3Q14050 684 aaPredicted RBP12.23□□□□□ -0.45
PSMA4-207ENST00000558635 KRT32Q14532 448 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 ADCK5Q3MIX3 580 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 KIAA1755Q5JYT7 1200 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 GPAT2Q6NUI2 795 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 CHST3Q7LGC8 479 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 IQCA1Q86XH1 822 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 MB21D2Q8IYB1 491 aaPredicted RBP12.23□□□□□ -0.45
PSMA4-207ENST00000558635 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
PSMA4-207ENST00000558635 MKL1Q969V6 931 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
PSMA4-207ENST00000558635 SH2D4AQ9H788 454 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 MYH8P13535 1937 aa12.23□□□□□ -0.45
PSMA4-207ENST00000558635 GREB1LQ9C091 1923 aaPredicted RBP12.22□□□□□ -0.45
PSMA4-207ENST00000558635 RAD21O60216 631 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 NOVP48745 357 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 ANTXR2P58335 489 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 MAP2K1Q02750 393 aaPredicted RBP12.22□□□□□ -0.45
PSMA4-207ENST00000558635 CCDC178Q5BJE1 867 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 TREML2Q5T2D2 321 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 RCSD1Q6JBY9 416 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 ANKRD23Q86SG2 305 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 LRRC47Q8N1G4 583 aaKnown RBP12.22□□□□□ -0.45
PSMA4-207ENST00000558635 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 PROCA1Q8NCQ7 364 aaPredicted RBP12.22□□□□□ -0.45
PSMA4-207ENST00000558635 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 TTC14Q96N46 770 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 NEK1Q96PY6 1258 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 UBAC1Q9BSL1 405 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 VCPKMTQ9H867 229 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 GOPCQ9HD26 462 aa12.22□□□□□ -0.45
PSMA4-207ENST00000558635 TNKSO95271 1327 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 PDHXO00330 501 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.45
PSMA4-207ENST00000558635 PRC1O43663 620 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
PSMA4-207ENST00000558635 VCAM1P19320 739 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 MCM5P33992 734 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 DGKHQ86XP1 1220 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 SPICE1Q8N0Z3 855 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 ENAHQ8N8S7 591 aaPredicted RBP12.21□□□□□ -0.45
PSMA4-207ENST00000558635 JAKMIP1Q96N16 626 aaKnown RBP12.21□□□□□ -0.45
PSMA4-207ENST00000558635 TMEM47Q9BQJ4 181 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 RNF186Q9NXI6 227 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 AGTPBP1Q9UPW5 1226 aa12.21□□□□□ -0.45
PSMA4-207ENST00000558635 THSD7BQ9C0I4 1608 aa12.21□□□□□ -0.46
PSMA4-207ENST00000558635 PCNTO95613 3336 aa12.21□□□□□ -0.46
PSMA4-207ENST00000558635 F5H6K3 240 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 TRPA1O75762 1119 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 CPA1P15085 419 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 KLRC3Q07444 240 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 SEC23AQ15436 765 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 ANKS1AQ92625 1134 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 LPAR1Q92633 364 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 RPAP3Q9H6T3 665 aaPredicted RBP12.2□□□□□ -0.46
PSMA4-207ENST00000558635 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
PSMA4-207ENST00000558635 ERICH2A1L162 156 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 NDUFB10O96000 172 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 PSMA5P28066 241 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 WTAPQ15007 396 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 TAF1CQ15572 869 aaPredicted RBP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 IFIT1BQ5T764 474 aaKnown RBP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 SLFN13Q68D06 897 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 DHX32Q7L7V1 743 aaKnown RBP12.19□□□□□ -0.46
PSMA4-207ENST00000558635 GMCL1P1Q8NEA9 526 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 IGDCC4Q8TDY8 1250 aa12.19□□□□□ -0.46
PSMA4-207ENST00000558635 NUP88Q99567 741 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms