RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
AP4E1-202ENST00000558439 WDR66Q8TBY9 1149 aa17.36■□□□□ 0.37
AP4E1-202ENST00000558439 TBC1D7Q9P0N9 293 aa17.36■□□□□ 0.37
AP4E1-202ENST00000558439 NOP2P46087 812 aaKnown RBP17.36■□□□□ 0.37
AP4E1-202ENST00000558439 NONOQ15233 471 aaKnown RBP eCLIP17.36■□□□□ 0.37
AP4E1-202ENST00000558439 ZNF804BA4D1E1 1349 aa17.36■□□□□ 0.37
AP4E1-202ENST00000558439 CAPN2P17655 700 aa17.36■□□□□ 0.37
AP4E1-202ENST00000558439 SLC35F6Q8N357 371 aa17.36■□□□□ 0.37
AP4E1-202ENST00000558439 FAM207AQ9NSI2 230 aaPredicted RBP17.36■□□□□ 0.37
AP4E1-202ENST00000558439 BICDL2A1A5D9 508 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 ENC1O14682 589 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 PRPF3O43395 683 aaKnown RBP17.35■□□□□ 0.37
AP4E1-202ENST00000558439 KIF20AO95235 890 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 SV2BQ7L1I2 683 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 GTPBP6O43824 516 aaPredicted RBP17.35■□□□□ 0.37
AP4E1-202ENST00000558439 COPB1P53618 953 aaKnown RBP17.35■□□□□ 0.37
AP4E1-202ENST00000558439 ALS2CR12Q96Q35 445 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 MINPP1Q9UNW1 487 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 SMC1AQ14683 1233 aaKnown RBP17.35■□□□□ 0.37
AP4E1-202ENST00000558439 LRP10Q7Z4F1 713 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 EYA3Q99504 573 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 FBXO2Q9UK22 296 aaPredicted RBP17.35■□□□□ 0.37
AP4E1-202ENST00000558439 OVOS2A0A0G2JMS6 1433 aa17.35■□□□□ 0.37
AP4E1-202ENST00000558439 DDAH1O94760 285 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 GPR161Q8N6U8 529 aaKnown RBP17.34■□□□□ 0.37
AP4E1-202ENST00000558439 EHBP1Q8NDI1 1231 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 OR8K1Q8NGG5 319 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 LRWD1Q9UFC0 647 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
AP4E1-202ENST00000558439 LMTK3Q96Q04 1460 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 FAM170AA1A519 330 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 TRAF5O00463 557 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 FRMPD2Q68DX3 1309 aaPredicted RBP17.34■□□□□ 0.37
AP4E1-202ENST00000558439 ST5P78524 1137 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 CUL4BQ13620 913 aa17.34■□□□□ 0.37
AP4E1-202ENST00000558439 ZC3H12CQ9C0D7 883 aaKnown RBP17.34■□□□□ 0.37
AP4E1-202ENST00000558439 TACC1O75410 805 aa17.33■□□□□ 0.37
AP4E1-202ENST00000558439 RNASE9P60153 205 aaKnown RBP17.33■□□□□ 0.37
AP4E1-202ENST00000558439 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.37
AP4E1-202ENST00000558439 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.37
AP4E1-202ENST00000558439 ATP8A2Q9NTI2 1148 aa17.33■□□□□ 0.37
AP4E1-202ENST00000558439 TMCO5BA8MYB1 307 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 ZNF622Q969S3 477 aaKnown RBP eCLIP17.33■□□□□ 0.36
AP4E1-202ENST00000558439 JAKMIP2Q96AA8 810 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 SLC39A2Q9NP94 309 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 TUBE1Q9UJT0 475 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 PTPAQ15257 358 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 NKX1-1Q15270 411 aaPredicted RBP17.33■□□□□ 0.36
AP4E1-202ENST00000558439 SYCP1Q15431 976 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 WDR24Q96S15 920 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 PLEKHA4Q9H4M7 779 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 ABCC12Q96J65 1359 aa17.33■□□□□ 0.36
AP4E1-202ENST00000558439 HLA-DOAP06340 250 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 HLTFQ14527 1009 aaKnown RBP eCLIP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 DNAJC21Q5F1R6 531 aaKnown RBP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 CT47A1Q5JQC4 288 aaPredicted RBP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 ZNF34Q8IZ26 560 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 TXLNBQ8N3L3 684 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 SPAG5Q96R06 1193 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 NAA15Q9BXJ9 866 aaKnown RBP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 ST7Q9NRC1 585 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 PHLPP2Q6ZVD8 1323 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 H0YHG0 523 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 CTIFO43310 598 aaKnown RBP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 MFSD14BQ5SR56 506 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 TMTC3Q6ZXV5 915 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 HDXQ7Z353 690 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 NBPF11Q86T75 865 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 NEK11Q8NG66 645 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 ANKRD7Q92527 254 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 EPN1Q9Y6I3 576 aaPredicted RBP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 PP2D1A8MPX8 630 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 REXO1Q8N1G1 1221 aaKnown RBP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 LRRC47Q8N1G4 583 aaKnown RBP17.32■□□□□ 0.36
AP4E1-202ENST00000558439 SNX29Q8TEQ0 813 aa17.32■□□□□ 0.36
AP4E1-202ENST00000558439 TRIM49BA6NDI0 452 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 CKAP4Q07065 602 aaKnown RBP17.31■□□□□ 0.36
AP4E1-202ENST00000558439 TYW1BQ6NUM6 668 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 USP17L2Q6R6M4 530 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 FAM84BQ96KN1 310 aaPredicted RBP17.31■□□□□ 0.36
AP4E1-202ENST00000558439 B4DLN1 442 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 MCM3P25205 808 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 TRIM14Q14142 442 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 KRT31Q15323 416 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 FCHSD1Q86WN1 690 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 NELFCDQ8IXH7 590 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 PARD6BQ9BYG5 372 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 NLRC4Q9NPP4 1024 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 BSDC1Q9NW68 430 aaPredicted RBP17.31■□□□□ 0.36
AP4E1-202ENST00000558439 SALL1Q9NSC2 1324 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 PPARDQ03181 441 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 ODF2Q5BJF6 829 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 NYAP1Q6ZVC0 841 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 DCP1AQ9NPI6 582 aaPredicted RBP17.31■□□□□ 0.36
AP4E1-202ENST00000558439 RSPH14Q9UHP6 348 aa17.31■□□□□ 0.36
AP4E1-202ENST00000558439 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
AP4E1-202ENST00000558439 PLCG2P16885 1265 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms