RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PHKBQ93100 1093 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 SPZ1Q9BXG8 430 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 ISY1Q9ULR0 285 aaKnown RBP19.57■□□□□ 0.72
SNX1-203ENST00000558040 SNCAIPQ9Y6H5 919 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 ZHX2Q9Y6X8 837 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 OTOFQ9HC10 1997 aa19.57■□□□□ 0.72
SNX1-203ENST00000558040 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
SNX1-203ENST00000558040 CNTNAP5Q8WYK1 1306 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 DEXIO95424 95 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 GOLGA8HP0CJ92 632 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 NUCB2P80303 420 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 FUT2Q10981 343 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 LARP1BQ659C4 914 aaKnown RBP19.56■□□□□ 0.72
SNX1-203ENST00000558040 NBPF11Q86T75 865 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 CMTR1Q8N1G2 835 aaKnown RBP19.56■□□□□ 0.72
SNX1-203ENST00000558040 CCDC82Q8N4S0 544 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 LPAR1Q92633 364 aa19.56■□□□□ 0.72
SNX1-203ENST00000558040 C19orf81C9J6K1 198 aa19.55■□□□□ 0.72
SNX1-203ENST00000558040 PRPF3O43395 683 aaKnown RBP19.55■□□□□ 0.72
SNX1-203ENST00000558040 BMP3P12645 472 aa19.55■□□□□ 0.72
SNX1-203ENST00000558040 ZYXQ15942 572 aaKnown RBP19.55■□□□□ 0.72
SNX1-203ENST00000558040 RASGRP2Q7LDG7 609 aa19.55■□□□□ 0.72
SNX1-203ENST00000558040 C2orf69Q8N8R5 385 aa19.55■□□□□ 0.72
SNX1-203ENST00000558040 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
SNX1-203ENST00000558040 GBA2Q9HCG7 927 aaPredicted RBP19.55■□□□□ 0.72
SNX1-203ENST00000558040 GPCPD1Q9NPB8 672 aa19.55■□□□□ 0.72
SNX1-203ENST00000558040 DTNBO60941 627 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 CELF2O95319 508 aaKnown RBP19.54■□□□□ 0.72
SNX1-203ENST00000558040 FDPSP14324 419 aaKnown RBP19.54■□□□□ 0.72
SNX1-203ENST00000558040 BACE1P56817 501 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 SPP2Q13103 211 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 MTMR2Q13614 643 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 LDLRAD1Q5T700 205 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 MOB2Q70IA6 237 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 KCTD1Q719H9 257 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 ERO1BQ86YB8 467 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 SPICE1Q8N0Z3 855 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 ELP3Q9H9T3 547 aa19.54■□□□□ 0.72
SNX1-203ENST00000558040 SPDYE5A6NIY4 337 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 WDR46O15213 610 aaKnown RBP19.53■□□□□ 0.72
SNX1-203ENST00000558040 STX6O43752 255 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 ITGBL1O95965 494 aaPredicted RBP19.53■□□□□ 0.72
SNX1-203ENST00000558040 SYT1P21579 422 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 PPATQ06203 517 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 RGS22Q8NE09 1264 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 RRP36Q96EU6 259 aaKnown RBP19.53■□□□□ 0.72
SNX1-203ENST00000558040 ALG1Q9BT22 464 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 SEC63Q9UGP8 760 aaKnown RBP19.53■□□□□ 0.72
SNX1-203ENST00000558040 AFG3L2Q9Y4W6 797 aa19.53■□□□□ 0.72
SNX1-203ENST00000558040 V9GY48 417 aaPredicted RBP19.53■□□□□ 0.72
SNX1-203ENST00000558040 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.72
SNX1-203ENST00000558040 UBE2Q2LH0YL09 131 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 H3BQV1 296 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 XBP1P17861 261 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 FMR1Q06787 632 aaKnown RBP eCLIP19.52■□□□□ 0.728e-16■■■■■ 29.9
SNX1-203ENST00000558040 IKQ13123 557 aaPredicted RBP19.52■□□□□ 0.72
SNX1-203ENST00000558040 TRIM29Q14134 588 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 IFFO2Q5TF58 517 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 C8orf76Q96K31 380 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 RIOX1Q9H6W3 641 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 TMOD4Q9NZQ9 345 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 PHIPQ8WWQ0 1821 aa19.52■□□□□ 0.72
SNX1-203ENST00000558040 TMEM232C9JQI7 657 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 KIF3CO14782 793 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 STAT2P52630 851 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 FAM83BQ5T0W9 1011 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 FAM160B2Q86V87 743 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 CHURC1Q8WUH1 139 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 CLMNQ96JQ2 1002 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 C12orf42Q96LP6 360 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 NUP88Q99567 741 aaPredicted RBP19.51■□□□□ 0.71
SNX1-203ENST00000558040 UBA5Q9GZZ9 404 aa19.51■□□□□ 0.71
SNX1-203ENST00000558040 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.51■□□□□ 0.71
SNX1-203ENST00000558040 VPS37CA5D8V6 355 aaPredicted RBP19.5■□□□□ 0.71
SNX1-203ENST00000558040 CYTH3O43739 400 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 PLA2G6O60733 806 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 SCG2P13521 617 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 PPIL2Q13356 520 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
SNX1-203ENST00000558040 KIAA1755Q5JYT7 1200 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 TTBK2Q6IQ55 1244 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 BTNL9Q6UXG8 535 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 ADGRF4Q8IZF3 695 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 SLC10A4Q96EP9 437 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 OTUD5Q96G74 571 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 FEM1BQ9UK73 627 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 TRPM7Q96QT4 1865 aa19.5■□□□□ 0.71
SNX1-203ENST00000558040 MYH6P13533 1939 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 CXCL11O14625 94 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 VCAM1P19320 739 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 SLC16A2P36021 539 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 HMGCS2P54868 508 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 PKN1Q16512 942 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 SH3D19Q5HYK7 790 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 SYDE2Q5VT97 1194 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 OPTNQ96CV9 577 aa19.49■□□□□ 0.71
SNX1-203ENST00000558040 CPVLQ9H3G5 476 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms