RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 FAM47AQ5JRC9 791 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 FAM83BQ5T0W9 1011 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 SAMD1Q6SPF0 538 aaPredicted RBP19.87■□□□□ 0.77
NEDD4-212ENST00000557845 CEP95Q96GE4 821 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 FBXO28Q9NVF7 368 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 MTMR4Q9NYA4 1195 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 IVNS1ABPQ9Y6Y0 642 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 A0A0G2JMZ2 1700 aa19.87■□□□□ 0.77
NEDD4-212ENST00000557845 PDE4DIPQ5VU43 2346 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 SDSP20132 328 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 GRB14Q14449 540 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 PLS1Q14651 629 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 CCL14Q16627 93 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 MAP3K21Q5TCX8 1036 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 UBE2Q1Q7Z7E8 422 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 SHCBP1Q8NEM2 672 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 APBA2Q99767 749 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 CRISPLD2Q9H0B8 497 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 INCENPQ9NQS7 918 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 ANAPC4Q9UJX5 808 aa19.86■□□□□ 0.77
NEDD4-212ENST00000557845 COL11A1P12107 1806 aaPredicted RBP19.86■□□□□ 0.77
NEDD4-212ENST00000557845 STRNO43815 780 aa19.85■□□□□ 0.77
NEDD4-212ENST00000557845 TTLL1O95922 423 aa19.85■□□□□ 0.77
NEDD4-212ENST00000557845 FGAP02671 866 aa19.85■□□□□ 0.77
NEDD4-212ENST00000557845 HSPD1P10809 573 aaKnown RBP19.85■□□□□ 0.77
NEDD4-212ENST00000557845 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
NEDD4-212ENST00000557845 ERCC3P19447 782 aa19.85■□□□□ 0.77
NEDD4-212ENST00000557845 TMEM132BQ14DG7 1078 aa19.85■□□□□ 0.77
NEDD4-212ENST00000557845 PPP1R9AQ9ULJ8 1098 aa19.85■□□□□ 0.77
NEDD4-212ENST00000557845 SYNPO2Q9UMS6 1093 aa19.85■□□□□ 0.77
NEDD4-212ENST00000557845 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.85■□□□□ 0.77
NEDD4-212ENST00000557845 NDUFB10O96000 172 aa19.84■□□□□ 0.77
NEDD4-212ENST00000557845 HOXC6P09630 235 aa19.84■□□□□ 0.77
NEDD4-212ENST00000557845 PRKAR2AP13861 404 aaKnown RBP19.84■□□□□ 0.77
NEDD4-212ENST00000557845 CACNB2Q08289 660 aaPredicted RBP19.84■□□□□ 0.77
NEDD4-212ENST00000557845 ZNF589Q86UQ0 364 aaPredicted RBP19.84■□□□□ 0.77
NEDD4-212ENST00000557845 NUP88Q99567 741 aaPredicted RBP19.84■□□□□ 0.77
NEDD4-212ENST00000557845 MROH8Q9H579 483 aa19.84■□□□□ 0.77
NEDD4-212ENST00000557845 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.77
NEDD4-212ENST00000557845 ZNFX1Q9P2E3 1918 aaKnown RBP19.83■□□□□ 0.77
NEDD4-212ENST00000557845 VWA5AO00534 786 aa19.83■□□□□ 0.77
NEDD4-212ENST00000557845 NCAPG2Q86XI2 1143 aa19.83■□□□□ 0.77
NEDD4-212ENST00000557845 NPLOC4Q8TAT6 608 aa19.83■□□□□ 0.77
NEDD4-212ENST00000557845 FLRT1Q9NZU1 646 aa19.83■□□□□ 0.77
NEDD4-212ENST00000557845 TACC3Q9Y6A5 838 aa19.83■□□□□ 0.77
NEDD4-212ENST00000557845 CCDC171Q6TFL3 1326 aa19.82■□□□□ 0.76
NEDD4-212ENST00000557845 TSPY2A6NKD2 308 aa19.82■□□□□ 0.76
NEDD4-212ENST00000557845 FARP2O94887 1054 aaPredicted RBP19.82■□□□□ 0.76
NEDD4-212ENST00000557845 SLC25A27O95847 323 aa19.82■□□□□ 0.76
NEDD4-212ENST00000557845 FGRP09769 529 aa19.82■□□□□ 0.76
NEDD4-212ENST00000557845 DPP9Q86TI2 863 aa19.82■□□□□ 0.76
NEDD4-212ENST00000557845 PRPF38AQ8NAV1 312 aaKnown RBP19.82■□□□□ 0.76
NEDD4-212ENST00000557845 GMCL1P1Q8NEA9 526 aa19.82■□□□□ 0.76
NEDD4-212ENST00000557845 PDE4AP27815 886 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 ADORA2AP29274 412 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 STAT3P40763 770 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 MFAP1P55081 439 aaKnown RBP19.81■□□□□ 0.76
NEDD4-212ENST00000557845 MFSD14CQ5VZR4 134 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 ABRAQ8N0Z2 381 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 LRRC47Q8N1G4 583 aaKnown RBP19.81■□□□□ 0.76
NEDD4-212ENST00000557845 REPS2Q8NFH8 660 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 SLF1Q9BQI6 1058 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 IL17RBQ9NRM6 502 aa19.81■□□□□ 0.76
NEDD4-212ENST00000557845 HIP1O00291 1037 aa19.8■□□□□ 0.76
NEDD4-212ENST00000557845 ORC4O43929 436 aa19.8■□□□□ 0.76
NEDD4-212ENST00000557845 RANBP6O60518 1105 aaKnown RBP19.8■□□□□ 0.76
NEDD4-212ENST00000557845 CCND3P30281 292 aaPredicted RBP19.8■□□□□ 0.76
NEDD4-212ENST00000557845 PPP4R3BQ5MIZ7 849 aa19.8■□□□□ 0.76
NEDD4-212ENST00000557845 SLFN13Q68D06 897 aa19.8■□□□□ 0.76
NEDD4-212ENST00000557845 CWC27Q6UX04 472 aaKnown RBP19.8■□□□□ 0.76
NEDD4-212ENST00000557845 RIOX2Q8IUF8 465 aa19.8■□□□□ 0.76
NEDD4-212ENST00000557845 DPF3Q92784 378 aa19.8■□□□□ 0.76
NEDD4-212ENST00000557845 ZNF214Q9UL59 606 aaPredicted RBP19.8■□□□□ 0.76
NEDD4-212ENST00000557845 ZMYM6O95789 1325 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 ZNF236Q9UL36 1845 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 COBLO75128 1261 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 FCER1AP12319 257 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 ANKLE1Q8NAG6 615 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 HTATIP2Q9BUP3 242 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 DIAPH3Q9NSV4 1193 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 FEM1BQ9UK73 627 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 OGDHLQ9ULD0 1010 aa19.79■□□□□ 0.76
NEDD4-212ENST00000557845 NMT2O60551 498 aa19.78■□□□□ 0.76
NEDD4-212ENST00000557845 IGHA2P01877 340 aa19.78■□□□□ 0.76
NEDD4-212ENST00000557845 BMP3P12645 472 aa19.78■□□□□ 0.76
NEDD4-212ENST00000557845 PAWRQ96IZ0 340 aaKnown RBP19.78■□□□□ 0.76
NEDD4-212ENST00000557845 TOMM22Q9NS69 142 aa19.78■□□□□ 0.76
NEDD4-212ENST00000557845 SLC5A4Q9NY91 659 aa19.78■□□□□ 0.76
NEDD4-212ENST00000557845 STX8Q9UNK0 236 aa19.78■□□□□ 0.76
NEDD4-212ENST00000557845 ZBED4O75132 1171 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 CYP2C19P33261 490 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 NOVP48745 357 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 HAND2P61296 217 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 RRP12Q5JTH9 1297 aaKnown RBP19.77■□□□□ 0.76
NEDD4-212ENST00000557845 OLFML2BQ68BL8 750 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 LHX8Q68G74 356 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 NECAB2Q7Z6G3 386 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 KIFC2Q96AC6 838 aa19.77■□□□□ 0.76
NEDD4-212ENST00000557845 MCCP23508 829 aa19.76■□□□□ 0.75
NEDD4-212ENST00000557845 COPB2P35606 906 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms