RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 SCG2P13521 617 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 PTPRAP18433 802 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 ORC2Q13416 577 aaPredicted RBP12.14□□□□□ -0.47
GABRB3-213ENST00000557765 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 MIGA2Q7L4E1 593 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 MTMR8Q96EF0 704 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 CFAP45Q9UL16 551 aa12.14□□□□□ -0.47
GABRB3-213ENST00000557765 GOLGB1Q14789 3259 aaKnown RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 SPDYE5A6NIY4 337 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 SMIM22K7EJ46 135 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 BMP15O95972 392 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 TRAPPC10P48553 1259 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 OAZ1P54368 228 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 ST3GAL1Q11201 340 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 LDLRAD1Q5T700 205 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 FASTKD5Q7L8L6 764 aaKnown RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 FEZ1Q99689 392 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 ANP32EQ9BTT0 268 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 SCAND2PQ9GZW5 306 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 ZCCHC17Q9NP64 241 aaKnown RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-213ENST00000557765 BARHL2Q9NY43 387 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 TMOD4Q9NZQ9 345 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 SLC45A1Q9Y2W3 748 aa12.13□□□□□ -0.47
GABRB3-213ENST00000557765 MYH4Q9Y623 1939 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 ZBTB5O15062 677 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 GDF11O95390 407 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 NDUFB10O96000 172 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 ZBTB48P10074 688 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-213ENST00000557765 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
GABRB3-213ENST00000557765 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.47
GABRB3-213ENST00000557765 COPB2P35606 906 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 EVX2Q03828 476 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 PPIL2Q13356 520 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 COL9A3Q14050 684 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-213ENST00000557765 MB21D1Q8N884 522 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
GABRB3-213ENST00000557765 HOXC10Q9NYD6 342 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 SSC5DA1L4H1 1573 aa12.12□□□□□ -0.47
GABRB3-213ENST00000557765 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 ATP2A1O14983 1001 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 F13A1P00488 732 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 MMP1P03956 469 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 CCDC96Q2M329 555 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 RILPL1Q5EBL4 403 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-213ENST00000557765 SRBD1Q8N5C6 995 aaKnown RBP12.11□□□□□ -0.47
GABRB3-213ENST00000557765 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-213ENST00000557765 AMNQ9BXJ7 453 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 SENP2Q9HC62 589 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 C6orf50Q9HD87 102 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 MTMR6Q9Y217 621 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 RABGAP1Q9Y3P9 1069 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 AFG3L2Q9Y4W6 797 aa12.11□□□□□ -0.47
GABRB3-213ENST00000557765 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-213ENST00000557765 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-213ENST00000557765 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-213ENST00000557765 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
GABRB3-213ENST00000557765 INHBEP58166 350 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 KRT85P78386 507 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 FSTL1Q12841 308 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 GNL2Q13823 731 aaKnown RBP12.1□□□□□ -0.47
GABRB3-213ENST00000557765 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 LBX2Q6XYB7 198 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-213ENST00000557765 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
GABRB3-213ENST00000557765 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 MYL10Q9BUA6 226 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 PHF20Q9BVI0 1012 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-213ENST00000557765 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 ELP1O95163 1332 aa12.1□□□□□ -0.47
GABRB3-213ENST00000557765 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 FAM196BA6NMK8 535 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms