RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 PRRT2Q7Z6L0 340 aaPredicted RBP10.69□□□□□ -0.7
CHD8-214ENST00000557727 ZNF280CQ8ND82 737 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 NEDD1Q8NHV4 660 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 PICK1Q9NRD5 415 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.69□□□□□ -0.7
CHD8-214ENST00000557727 CTNNA3Q9UI47 895 aa10.69□□□□□ -0.7
CHD8-214ENST00000557727 ZSWIM8A7E2V4 1837 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 CXCL11O14625 94 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 NMT2O60551 498 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
CHD8-214ENST00000557727 HSPA4P34932 840 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 TFAP4Q01664 338 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 PDE4BQ07343 736 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 SPP2Q13103 211 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 E2F4Q16254 413 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 IMMTQ16891 758 aaKnown RBP10.68□□□□□ -0.7
CHD8-214ENST00000557727 TSGA10IPQ3SY00 556 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 SH3D19Q5HYK7 790 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 CREB3L3Q68CJ9 461 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
CHD8-214ENST00000557727 CEP95Q96GE4 821 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 USP26Q9BXU7 913 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 MKNK2Q9HBH9 465 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
CHD8-214ENST00000557727 SMCHD1A6NHR9 2005 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 DOCK3Q8IZD9 2030 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 MANSC4A6NHS7 340 aaPredicted RBP10.67□□□□□ -0.7
CHD8-214ENST00000557727 TRIM75PA6NK02 468 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 B4E1Z4 1266 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 E7EWF7 191 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 EPB41L2O43491 1005 aaKnown RBP10.67□□□□□ -0.7
CHD8-214ENST00000557727 SLC3A2P08195 630 aaKnown RBP10.67□□□□□ -0.7
CHD8-214ENST00000557727 EEF2P13639 858 aaKnown RBP10.67□□□□□ -0.7
CHD8-214ENST00000557727 GTF2A2P52657 109 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 BACE1P56817 501 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 ANTXR2P58335 489 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 GRM1Q13255 1194 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 MTMR2Q13614 643 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 RAB3GAP1Q15042 981 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 CASC1Q6TDU7 716 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 MFSD6Q6ZSS7 791 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 KIAA1211Q6ZU35 1233 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 CYB5R4Q7L1T6 521 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 MB21D2Q8IYB1 491 aaPredicted RBP10.67□□□□□ -0.7
CHD8-214ENST00000557727 FAM43AQ8N2R8 423 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 C12orf42Q96LP6 360 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 TBC1D2Q9BYX2 928 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 KIAA1683Q9H0B3 1180 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 MTMR4Q9NYA4 1195 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 TMX2Q9Y320 296 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 MGAMO43451 1857 aa10.67□□□□□ -0.7
CHD8-214ENST00000557727 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 CCL15-CCL14A0A0B4J2E2 113 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 BTBD19C9JJ37 291 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 MPHOSPH10O00566 681 aaKnown RBP10.66□□□□□ -0.7
CHD8-214ENST00000557727 KDM4AO75164 1064 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 HMGCS2P54868 508 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 ICA1Q05084 483 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 SNAPC2Q13487 334 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 CCL15Q16663 113 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 ADCK5Q3MIX3 580 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 TREML2Q5T2D2 321 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 ZNF444Q8N0Y2 327 aaPredicted RBP10.66□□□□□ -0.7
CHD8-214ENST00000557727 MKL1Q969V6 931 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 IL17RAQ96F46 866 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 RNF41Q9H4P4 317 aaPredicted RBP10.66□□□□□ -0.7
CHD8-214ENST00000557727 KANSL2Q9H9L4 492 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 ZNF287Q9HBT7 754 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 CABP5Q9NP86 173 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 NYAP2Q9P242 653 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 CASP8AP2Q9UKL3 1982 aa10.66□□□□□ -0.7
CHD8-214ENST00000557727 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 RANBP6O60518 1105 aaKnown RBP10.65□□□□□ -0.7
CHD8-214ENST00000557727 REC8O95072 547 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 TSPY3P0CV98 308 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 TSPY8P0CW00 308 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 CETPP11597 493 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 PRSS12P56730 875 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 SEC23AQ15436 765 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 RRP12Q5JTH9 1297 aaKnown RBP10.65□□□□□ -0.7
CHD8-214ENST00000557727 PROCA1Q8NCQ7 364 aaPredicted RBP10.65□□□□□ -0.7
CHD8-214ENST00000557727 ANKS1AQ92625 1134 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 CFHR5Q9BXR6 569 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 R3HDMLQ9H3Y0 253 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 AS3MTQ9HBK9 375 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
CHD8-214ENST00000557727 BAZ2BQ9UIF8 2168 aaKnown RBP10.65□□□□□ -0.71
CHD8-214ENST00000557727 TSPY2A6NKD2 308 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 C19orf81C9J6K1 198 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 VCAM1P19320 739 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 NT5C2P49902 561 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 INHBEP58166 350 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 RASGRP2Q7LDG7 609 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 ANKRD23Q86SG2 305 aa10.64□□□□□ -0.71
CHD8-214ENST00000557727 ENAHQ8N8S7 591 aaPredicted RBP10.64□□□□□ -0.71
CHD8-214ENST00000557727 ESR2Q92731 530 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms