RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 NOL8Q76FK4 1167 aaKnown RBP17.88■□□□□ 0.45
NEDD1-213ENST00000557644 CATIPQ7Z7H3 387 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 CCDC144CPQ8IYA2 1237 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 NUP133Q8WUM0 1156 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 GMCL1Q96IK5 515 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 TANGO6Q9C0B7 1094 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 NAP1L2Q9ULW6 460 aaPredicted RBP17.88■□□□□ 0.45
NEDD1-213ENST00000557644 SLC12A7Q9Y666 1083 aa17.88■□□□□ 0.45
NEDD1-213ENST00000557644 LOC285556D6RIA3 1793 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 WDR46O15213 610 aaKnown RBP17.87■□□□□ 0.45
NEDD1-213ENST00000557644 SNHG28P0DPA3 235 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 CCDC96Q2M329 555 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 APOA5Q6Q788 366 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 FBXO28Q9NVF7 368 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 BMP3P12645 472 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 RABEP1Q15276 862 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 SAMD1Q6SPF0 538 aaPredicted RBP17.87■□□□□ 0.45
NEDD1-213ENST00000557644 ANKRD23Q86SG2 305 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 MICU3Q86XE3 530 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 GPCPD1Q9NPB8 672 aa17.87■□□□□ 0.45
NEDD1-213ENST00000557644 CYP2C8P10632 490 aa17.86■□□□□ 0.45
NEDD1-213ENST00000557644 TTBK2Q6IQ55 1244 aa17.86■□□□□ 0.45
NEDD1-213ENST00000557644 CATSPERGQ6ZRH7 1159 aa17.86■□□□□ 0.45
NEDD1-213ENST00000557644 DCAF4Q8WV16 495 aa17.86■□□□□ 0.45
NEDD1-213ENST00000557644 HOXA7P31268 230 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-213ENST00000557644 STAG2Q8N3U4 1231 aa17.86■□□□□ 0.45
NEDD1-213ENST00000557644 ASCC2Q9H1I8 757 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-213ENST00000557644 CPVLQ9H3G5 476 aa17.86■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L15C9J2P7 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L13C9JLJ4 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 TMEM232C9JQI7 657 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L11C9JVI0 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L18D6R9N7 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L22D6RA61 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L17D6RBQ6 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L19D6RCP7 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L20D6RJB6 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 ZNF543Q08ER8 600 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 USP17L24Q0WX57 530 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 ALDH8A1Q9H2A2 487 aaPredicted RBP17.85■□□□□ 0.45
NEDD1-213ENST00000557644 TPCN1Q9ULQ1 816 aa17.85■□□□□ 0.45
NEDD1-213ENST00000557644 FLOT1O75955 427 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 CD2BP2O95400 341 aaKnown RBP17.84■□□□□ 0.45
NEDD1-213ENST00000557644 SLC16A2P36021 539 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 MAD2L2Q9UI95 211 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 HPS5Q9UPZ3 1129 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 ZBTB43O43298 467 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 DDAH1O94760 285 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
NEDD1-213ENST00000557644 IRX3P78415 501 aaPredicted RBP17.84■□□□□ 0.45
NEDD1-213ENST00000557644 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
NEDD1-213ENST00000557644 THSD7BQ9C0I4 1608 aa17.84■□□□□ 0.45
NEDD1-213ENST00000557644 PDIA3P30101 505 aaKnown RBP17.83■□□□□ 0.45
NEDD1-213ENST00000557644 EVCP57679 992 aa17.83■□□□□ 0.45
NEDD1-213ENST00000557644 GRM4Q14833 912 aa17.83■□□□□ 0.45
NEDD1-213ENST00000557644 SYNE3Q6ZMZ3 975 aa17.83■□□□□ 0.45
NEDD1-213ENST00000557644 UBA5Q9GZZ9 404 aa17.83■□□□□ 0.45
NEDD1-213ENST00000557644 PEX10O60683 326 aa17.83■□□□□ 0.44
NEDD1-213ENST00000557644 IKQ13123 557 aaPredicted RBP17.83■□□□□ 0.44
NEDD1-213ENST00000557644 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.44
NEDD1-213ENST00000557644 POTEEQ6S8J3 1075 aa17.83■□□□□ 0.44
NEDD1-213ENST00000557644 REM2Q8IYK8 340 aaPredicted RBP17.83■□□□□ 0.44
NEDD1-213ENST00000557644 FANCBQ8NB91 859 aa17.83■□□□□ 0.44
NEDD1-213ENST00000557644 KIFC2Q96AC6 838 aa17.83■□□□□ 0.44
NEDD1-213ENST00000557644 SLC45A1Q9Y2W3 748 aa17.83■□□□□ 0.44
NEDD1-213ENST00000557644 PALM3A6NDB9 673 aaPredicted RBP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 STAT2P52630 851 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 STK3Q13188 491 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 PABPC4Q13310 644 aaKnown RBP eCLIP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 ANKRD1Q15327 319 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 TAF1CQ15572 869 aaPredicted RBP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 ASPRV1Q53RT3 343 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 CMTR1Q8N1G2 835 aaKnown RBP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 LARGE1O95461 756 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 OSBPP22059 807 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 CDC27P30260 824 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 CCT2P78371 535 aaKnown RBP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 COG2Q14746 738 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 GPATCH4Q5T3I0 446 aaKnown RBP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 NBPF11Q86T75 865 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 CTCFLQ8NI51 663 aaPredicted RBP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 ATG4CQ96DT6 458 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 R3HDMLQ9H3Y0 253 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
NEDD1-213ENST00000557644 FEM1BQ9UK73 627 aa17.82■□□□□ 0.44
NEDD1-213ENST00000557644 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
NEDD1-213ENST00000557644 GOLGA8AA7E2F4 631 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 KLRF2D3W0D1 207 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 TRPA1O75762 1119 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 CALM1P0DP23 149 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 CALM2P0DP24 149 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 CALM3P0DP25 149 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
NEDD1-213ENST00000557644 HERVK_113P62684 666 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 CRHR2Q13324 411 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
NEDD1-213ENST00000557644 NCOA5Q9HCD5 579 aaKnown RBP17.81■□□□□ 0.44
NEDD1-213ENST00000557644 RNF186Q9NXI6 227 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms