RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
RIPK3-206ENST00000557624 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
RIPK3-206ENST00000557624 HPS5Q9UPZ3 1129 aa16.51■□□□□ 0.23
RIPK3-206ENST00000557624 LOC285556D6RIA3 1793 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 CCL15-CCL14A0A0B4J2E2 113 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
RIPK3-206ENST00000557624 CETPP11597 493 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 MCM2P49736 904 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 CCT2P78371 535 aaKnown RBP16.5■□□□□ 0.23
RIPK3-206ENST00000557624 GRM4Q14833 912 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 CCL15Q16663 113 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 FANCBQ8NB91 859 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 ZNF274Q96GC6 653 aaPredicted RBP16.5■□□□□ 0.23
RIPK3-206ENST00000557624 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 CAPNS2Q96L46 248 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 TANGO6Q9C0B7 1094 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
RIPK3-206ENST00000557624 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
RIPK3-206ENST00000557624 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
RIPK3-206ENST00000557624 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
RIPK3-206ENST00000557624 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
RIPK3-206ENST00000557624 SNHG28P0DPA3 235 aa16.49■□□□□ 0.23
RIPK3-206ENST00000557624 BMP3P12645 472 aa16.49■□□□□ 0.23
RIPK3-206ENST00000557624 ZNF543Q08ER8 600 aa16.49■□□□□ 0.23
RIPK3-206ENST00000557624 RTN1Q16799 776 aa16.49■□□□□ 0.23
RIPK3-206ENST00000557624 TREML2Q5T2D2 321 aa16.49■□□□□ 0.23
RIPK3-206ENST00000557624 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
RIPK3-206ENST00000557624 FASTKD5Q7L8L6 764 aaKnown RBP16.49■□□□□ 0.23
RIPK3-206ENST00000557624 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
RIPK3-206ENST00000557624 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
RIPK3-206ENST00000557624 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
RIPK3-206ENST00000557624 KIF5BP33176 963 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 RCAN1P53805 252 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 IKQ13123 557 aaPredicted RBP16.48■□□□□ 0.23
RIPK3-206ENST00000557624 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 NECAB1Q8N987 351 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
RIPK3-206ENST00000557624 BRI3BPQ8WY22 251 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 MAD2L2Q9UI95 211 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 PFKFB2O60825 505 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 HSPA6P17066 643 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 CDC27P30260 824 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 MOGSQ13724 837 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 GPATCH4Q5T3I0 446 aaKnown RBP16.48■□□□□ 0.23
RIPK3-206ENST00000557624 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 SNX21Q969T3 373 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
RIPK3-206ENST00000557624 MAP3K14Q99558 947 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 CPVLQ9H3G5 476 aa16.48■□□□□ 0.23
RIPK3-206ENST00000557624 MANSC4A6NHS7 340 aaPredicted RBP16.47■□□□□ 0.23
RIPK3-206ENST00000557624 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 PLEKHA8P1O95397 391 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 SLC16A2P36021 539 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 SCRN1Q12765 414 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 NOGQ13253 232 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
RIPK3-206ENST00000557624 ZIC5Q96T25 663 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 SH2B1Q9NRF2 756 aaPredicted RBP16.47■□□□□ 0.23
RIPK3-206ENST00000557624 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 AGTPBP1Q9UPW5 1226 aa16.47■□□□□ 0.23
RIPK3-206ENST00000557624 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
RIPK3-206ENST00000557624 BTBD19C9JJ37 291 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 AOC2O75106 756 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 FLOT1O75955 427 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
RIPK3-206ENST00000557624 STAT2P52630 851 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 CCDC83Q8IWF9 413 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 CCDC82Q8N4S0 544 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 UBA5Q9GZZ9 404 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
RIPK3-206ENST00000557624 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.23
RIPK3-206ENST00000557624 NID2Q14112 1375 aa16.46■□□□□ 0.23
RIPK3-206ENST00000557624 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
RIPK3-206ENST00000557624 CPLX1O14810 134 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
RIPK3-206ENST00000557624 PPFIA3O75145 1194 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 ANP32AP39687 249 aaKnown RBP16.45■□□□□ 0.22
RIPK3-206ENST00000557624 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
RIPK3-206ENST00000557624 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 TMTC3Q6ZXV5 915 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 KIFC2Q96AC6 838 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 WDR33Q9C0J8 1336 aaKnown RBP16.45■□□□□ 0.22
RIPK3-206ENST00000557624 DTNBO60941 627 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 VEGFBP49765 207 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms