RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TFAP4Q01664 338 aa20.09■□□□□ 0.81
XRCC3-218ENST00000557439 DIXDC1Q155Q3 683 aa20.09■□□□□ 0.81
XRCC3-218ENST00000557439 PDXDC2PQ6P474 469 aa20.09■□□□□ 0.81
XRCC3-218ENST00000557439 PPFIBP1Q86W92 1011 aa20.09■□□□□ 0.81
XRCC3-218ENST00000557439 NBPF5PQ86XG9 351 aaPredicted RBP20.09■□□□□ 0.81
XRCC3-218ENST00000557439 CCDC12Q8WUD4 166 aaPredicted RBP20.09■□□□□ 0.81
XRCC3-218ENST00000557439 TAB2Q9NYJ8 693 aa20.09■□□□□ 0.81
XRCC3-218ENST00000557439 MYH8P13535 1937 aa20.08■□□□□ 0.81
XRCC3-218ENST00000557439 GSDMAQ96QA5 445 aa20.08■□□□□ 0.81
XRCC3-218ENST00000557439 SPATA31A5Q5VU36 1347 aa20.08■□□□□ 0.81
XRCC3-218ENST00000557439 SPATA31A7Q8IWB4 1347 aa20.08■□□□□ 0.81
XRCC3-218ENST00000557439 ORC4O43929 436 aa20.08■□□□□ 0.8
XRCC3-218ENST00000557439 GYPCP04921 128 aa20.08■□□□□ 0.8
XRCC3-218ENST00000557439 PBX1P40424 430 aa20.08■□□□□ 0.8
XRCC3-218ENST00000557439 PFKFB3Q16875 520 aaPredicted RBP20.08■□□□□ 0.8
XRCC3-218ENST00000557439 SLC35G1Q2M3R5 365 aa20.08■□□□□ 0.8
XRCC3-218ENST00000557439 ACRBPQ8NEB7 543 aa20.08■□□□□ 0.8
XRCC3-218ENST00000557439 EEF2KMTQ96G04 330 aa20.08■□□□□ 0.8
XRCC3-218ENST00000557439 TRIM49BA6NDI0 452 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 TUBB4AP04350 444 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 PNMA6AP0CW24 399 aaPredicted RBP20.07■□□□□ 0.8
XRCC3-218ENST00000557439 MAP3K9P80192 1104 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 PPP2R3AQ06190 1150 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 KRT31Q15323 416 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 DZIP1Q86YF9 867 aaKnown RBP20.07■□□□□ 0.8
XRCC3-218ENST00000557439 MRFAP1Q9Y605 127 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 ADGRG1Q9Y653 693 aa20.07■□□□□ 0.8
XRCC3-218ENST00000557439 GOLGA8HP0CJ92 632 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 IQUBQ8NA54 791 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 SH3RF3Q8TEJ3 882 aaPredicted RBP20.06■□□□□ 0.8
XRCC3-218ENST00000557439 THRAP3Q9Y2W1 955 aaKnown RBP20.06■□□□□ 0.8
XRCC3-218ENST00000557439 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 MFAP3LO75121 409 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 CCDC175P0C221 793 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 SMARCC1Q92922 1105 aaPredicted RBP20.06■□□□□ 0.8
XRCC3-218ENST00000557439 CCDC34Q96HJ3 373 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 TMEM60Q9H2L4 133 aa20.06■□□□□ 0.8
XRCC3-218ENST00000557439 N4BP3O15049 544 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 PLA2G4AP47712 749 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 PNMA1Q8ND90 353 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 KAT14Q9H8E8 782 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 SAP30BPQ9UHR5 308 aaKnown RBP20.05■□□□□ 0.8
XRCC3-218ENST00000557439 EFCAB8A8MWE9 144 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 GNPATO15228 680 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 TERF2Q15554 542 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 NELFBQ8WX92 580 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 ATP8A2Q9NTI2 1148 aa20.05■□□□□ 0.8
XRCC3-218ENST00000557439 COL5A3P25940 1745 aaPredicted RBP20.04■□□□□ 0.8
XRCC3-218ENST00000557439 USP5P45974 858 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 BLIDQ8IZY5 108 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 C4orf32Q8N8J7 132 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 PANX2Q96RD6 677 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 PUF60Q9UHX1 559 aaKnown RBP20.04■□□□□ 0.8
XRCC3-218ENST00000557439 BMP15O95972 392 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 PRCPP42785 496 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 BMS1Q14692 1282 aaKnown RBP20.04■□□□□ 0.8
XRCC3-218ENST00000557439 INF2Q27J81 1249 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 TMCO3Q6UWJ1 677 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 LRRC15Q8TF66 581 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 ARPP21Q9UBL0 812 aaPredicted RBP20.04■□□□□ 0.8
XRCC3-218ENST00000557439 NRAPQ86VF7 1730 aa20.04■□□□□ 0.8
XRCC3-218ENST00000557439 CYTH3O43739 400 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 SASH3O75995 380 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 ZRANB2O95218 330 aaKnown RBP eCLIP20.03■□□□□ 0.8
XRCC3-218ENST00000557439 PMS1P54277 932 aaKnown RBP20.03■□□□□ 0.8
XRCC3-218ENST00000557439 ERVK-24P63145 666 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 RPN1P04843 607 aaKnown RBP20.03■□□□□ 0.8
XRCC3-218ENST00000557439 GABPB1Q06547 395 aaPredicted RBP20.03■□□□□ 0.8
XRCC3-218ENST00000557439 FILIP1LQ4L180 1135 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 SLC10A5Q5PT55 438 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 HEATR3Q7Z4Q2 680 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 RASSF8Q8NHQ8 419 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 NOL10Q9BSC4 688 aaKnown RBP20.03■□□□□ 0.8
XRCC3-218ENST00000557439 SRRTQ9BXP5 876 aaKnown RBP20.03■□□□□ 0.8
XRCC3-218ENST00000557439 STX8Q9UNK0 236 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 KIAA1551Q9HCM1 1747 aa20.03■□□□□ 0.8
XRCC3-218ENST00000557439 STAT6P42226 847 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 PAK1Q13153 545 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 NFIXQ14938 502 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 ZNF569Q5MCW4 686 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 TGFBRAP1Q8WUH2 860 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 GOLGA6L9A6NEM1 432 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 GTPBP6O43824 516 aaPredicted RBP20.02■□□□□ 0.8
XRCC3-218ENST00000557439 PCP11498 1178 aaKnown RBP20.02■□□□□ 0.8
XRCC3-218ENST00000557439 TM4SF1P30408 202 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 COPB1P53618 953 aaKnown RBP20.02■□□□□ 0.8
XRCC3-218ENST00000557439 NAALADL2Q58DX5 795 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 WWC2Q6AWC2 1192 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 MKNK2Q9HBH9 465 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 ANKIB1Q9P2G1 1089 aa20.02■□□□□ 0.8
XRCC3-218ENST00000557439 COL22A1Q8NFW1 1626 aaPredicted RBP20.02■□□□□ 0.79
XRCC3-218ENST00000557439 KCNJ18B7U540 433 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 PES1O00541 588 aaKnown RBP20.01■□□□□ 0.79
XRCC3-218ENST00000557439 SEMA3EO15041 775 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 KCNJ12Q14500 433 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 C12orf60Q5U649 245 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 MAPKAPK5Q8IW41 473 aa20.01■□□□□ 0.79
XRCC3-218ENST00000557439 NUP88Q99567 741 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms