RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 STK32AQ8WU08 396 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 VPS33BQ9H267 617 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 ADARB2Q9NS39 739 aaKnown RBP6.43□□□□□ -1.38
SCFD1-223ENST00000557076 GPRC5DQ9NZD1 345 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 TIMELESSQ9UNS1 1208 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 FER1L6Q2WGJ9 1857 aa6.43□□□□□ -1.38
SCFD1-223ENST00000557076 FAM155AB1AL88 458 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 FSCN2O14926 492 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 RNMTO43148 476 aaKnown RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 PAX4O43316 350 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 TRPA1O75762 1119 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 CAMTA2O94983 1202 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 ATG7O95352 703 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 WISP1O95388 367 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 PTPRAP18433 802 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 PDE12Q6L8Q7 609 aaKnown RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 TXNDC11Q6PKC3 985 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 NPM2Q86SE8 214 aaKnown RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 NBPF5PQ86XG9 351 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 ARMC10Q8N2F6 343 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 GPR152Q8TDT2 470 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 UTP4Q969X6 686 aaKnown RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 CSRNP1Q96S65 589 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 PBX4Q9BYU1 374 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 GLIS2Q9BZE0 524 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 RASSF4Q9H2L5 321 aa6.42□□□□□ -1.38
SCFD1-223ENST00000557076 COL5A3P25940 1745 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-223ENST00000557076 ADAMTSL1Q8N6G6 1762 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 SZT2Q5T011 3432 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 TGFB1P01137 390 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 RPLP1P05386 114 aaKnown RBP6.41□□□□□ -1.38
SCFD1-223ENST00000557076 GRIK1P39086 918 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 HUNKP57058 714 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 KIF23Q02241 960 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-223ENST00000557076 NFIAQ12857 509 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 NAA30Q147X3 362 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-223ENST00000557076 DUOXA2Q1HG44 320 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 SULT6B1Q6IMI4 303 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 RGMBQ6NW40 437 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 NCAPG2Q86XI2 1143 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 AEBP1Q8IUX7 1158 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 CLP1Q92989 425 aaKnown RBP6.41□□□□□ -1.38
SCFD1-223ENST00000557076 WNT8BQ93098 351 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 FAM46AQ96IP4 442 aaKnown RBP6.41□□□□□ -1.38
SCFD1-223ENST00000557076 GOLGA2P5Q9HBQ8 144 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 SEC31BQ9NQW1 1179 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 ADAMTS7Q9UKP4 1686 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 AFDNP55196 1824 aaKnown RBP6.41□□□□□ -1.38
SCFD1-223ENST00000557076 SLX4Q8IY92 1834 aa6.41□□□□□ -1.38
SCFD1-223ENST00000557076 CUL9Q8IWT3 2517 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 TIAM2Q8IVF5 1701 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 TM4SF5O14894 197 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 A1BGP04217 495 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 TNNT2P45379 298 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-223ENST00000557076 IRAK1P51617 712 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 CXCL9Q07325 125 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 CRY2Q49AN0 593 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 TMEM164Q5U3C3 297 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 CAPN12Q6ZSI9 719 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 KIAA1211Q6ZU35 1233 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 CEP120Q8N960 986 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 MYRFLQ96LU7 910 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 DBNDD2Q9BQY9 259 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 ADAM19Q9H013 955 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 KCNK4Q9NYG8 393 aa6.4□□□□□ -1.38
SCFD1-223ENST00000557076 THSD7BQ9C0I4 1608 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 COL6A3P12111 3177 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 H3BRJ5 948 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 EPHA1P21709 976 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 CDC25BP30305 580 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 HOXA10P31260 410 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ZNF157P51786 506 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-223ENST00000557076 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
SCFD1-223ENST00000557076 RNF43Q68DV7 783 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ZNF790Q6PG37 636 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ZDHHC13Q8IUH4 622 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 NIM1KQ8IY84 436 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 TTC5Q8N0Z6 440 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 C2orf69Q8N8R5 385 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-223ENST00000557076 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ZNF408Q9H9D4 720 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ELP3Q9H9T3 547 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ZNRF3Q9ULT6 936 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 ZNF652Q9Y2D9 606 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 DLEC1Q9Y238 1755 aa6.39□□□□□ -1.39
SCFD1-223ENST00000557076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 SART1O43290 800 aaKnown RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 CYP2E1P05181 493 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 IL13P35225 146 aa6.38□□□□□ -1.39
SCFD1-223ENST00000557076 GMPSP49915 693 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 TNIP1Q15025 636 aa6.38□□□□□ -1.39
SCFD1-223ENST00000557076 ANKRD34AQ69YU3 496 aa6.38□□□□□ -1.39
SCFD1-223ENST00000557076 FBXO46Q6PJ61 603 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
SCFD1-223ENST00000557076 FOXD4L4Q8WXT5 416 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 POP1Q99575 1024 aaKnown RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 GBA2Q9HCG7 927 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-223ENST00000557076 OSGEPQ9NPF4 335 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms