RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 HERC6Q8IVU3 1022 aa15.37■□□□□ 0.05
ABCD4-226ENST00000556971 KIF28PB7ZC32 967 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
ABCD4-226ENST00000556971 IRX5P78411 483 aaPredicted RBP15.36■□□□□ 0.05
ABCD4-226ENST00000556971 NBPF20Q3BBV1 942 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 CAVIN4Q5BKX8 364 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 KLHDC9Q8NEP7 349 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 MAML3Q96JK9 1138 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 IGSF5Q9NSI5 407 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 DLL3Q9NYJ7 618 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 SCN5AQ14524 2016 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 SIP14410 1827 aa15.36■□□□□ 0.05
ABCD4-226ENST00000556971 C19orf81C9J6K1 198 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 AKR1A1P14550 325 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 PPP2R1AP30153 589 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 SIGLEC14Q08ET2 396 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 CLUL1Q15846 466 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 CCSAPQ6IQ19 270 aaPredicted RBP15.35■□□□□ 0.05
ABCD4-226ENST00000556971 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 ASIC4Q96FT7 647 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 NOC4LQ9BVI4 516 aaKnown RBP15.35■□□□□ 0.05
ABCD4-226ENST00000556971 PTPRSQ13332 1948 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 MYH2Q9UKX2 1941 aa15.35■□□□□ 0.05
ABCD4-226ENST00000556971 USP17L10C9JJH3 530 aa15.34■□□□□ 0.05
ABCD4-226ENST00000556971 NUBP1P53384 320 aa15.34■□□□□ 0.05
ABCD4-226ENST00000556971 SMAD2Q15796 467 aaKnown RBP15.34■□□□□ 0.05
ABCD4-226ENST00000556971 DEFB128Q7Z7B8 93 aa15.34■□□□□ 0.05
ABCD4-226ENST00000556971 PABPC5Q96DU9 382 aaKnown RBP15.34■□□□□ 0.05
ABCD4-226ENST00000556971 PDGFBP01127 241 aaPredicted RBP15.33■□□□□ 0.04
ABCD4-226ENST00000556971 ASGR1P07306 291 aa15.33■□□□□ 0.04
ABCD4-226ENST00000556971 FOXO4P98177 505 aa15.33■□□□□ 0.04
ABCD4-226ENST00000556971 SHROOM1Q2M3G4 852 aaPredicted RBP15.33■□□□□ 0.04
ABCD4-226ENST00000556971 PHOSPHO2Q8TCD6 241 aa15.33■□□□□ 0.04
ABCD4-226ENST00000556971 EMILIN3Q9NT22 766 aa15.33■□□□□ 0.04
ABCD4-226ENST00000556971 SLC5A4Q9NY91 659 aa15.33■□□□□ 0.04
ABCD4-226ENST00000556971 NRBP1Q9UHY1 535 aa15.33■□□□□ 0.04
ABCD4-226ENST00000556971 MYO7AQ13402 2215 aa15.32■□□□□ 0.04
ABCD4-226ENST00000556971 STXBP3O00186 592 aa15.32■□□□□ 0.04
ABCD4-226ENST00000556971 LMOD3Q0VAK6 560 aa15.32■□□□□ 0.04
ABCD4-226ENST00000556971 CCDC57Q2TAC2 916 aa15.32■□□□□ 0.04
ABCD4-226ENST00000556971 PUS3Q9BZE2 481 aaKnown RBP15.32■□□□□ 0.04
ABCD4-226ENST00000556971 DACH1Q9UI36 760 aa15.32■□□□□ 0.04
ABCD4-226ENST00000556971 NAV2Q8IVL1 2488 aa15.31■□□□□ 0.04
ABCD4-226ENST00000556971 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
ABCD4-226ENST00000556971 JAG1P78504 1218 aa15.31■□□□□ 0.04
ABCD4-226ENST00000556971 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
ABCD4-226ENST00000556971 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
ABCD4-226ENST00000556971 MOV10L1Q9BXT6 1211 aaKnown RBP15.31■□□□□ 0.04
ABCD4-226ENST00000556971 CLDND1Q9NY35 253 aa15.31■□□□□ 0.04
ABCD4-226ENST00000556971 ASH1LQ9NR48 2969 aaKnown RBP15.3■□□□□ 0.04
ABCD4-226ENST00000556971 ELL2O00472 640 aaPredicted RBP15.3■□□□□ 0.04
ABCD4-226ENST00000556971 STRNO43815 780 aa15.3■□□□□ 0.04
ABCD4-226ENST00000556971 PFKMP08237 780 aa15.3■□□□□ 0.04
ABCD4-226ENST00000556971 ZNF865P0CJ78 1059 aaPredicted RBP15.3■□□□□ 0.04
ABCD4-226ENST00000556971 COL11A1P12107 1806 aaPredicted RBP15.3■□□□□ 0.04
ABCD4-226ENST00000556971 ACTN1P12814 892 aa15.3■□□□□ 0.04
ABCD4-226ENST00000556971 ZYXQ15942 572 aaKnown RBP15.3■□□□□ 0.04
ABCD4-226ENST00000556971 LMBR1LQ6UX01 489 aa15.3■□□□□ 0.04
ABCD4-226ENST00000556971 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 MBTPS2O43462 519 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 LDHBP07195 334 aaKnown RBP15.29■□□□□ 0.04
ABCD4-226ENST00000556971 C6orf222P0C671 652 aaPredicted RBP15.29■□□□□ 0.04
ABCD4-226ENST00000556971 ERCC3P19447 782 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 RSPO4Q2I0M5 234 aaPredicted RBP15.29■□□□□ 0.04
ABCD4-226ENST00000556971 TCEAL5Q5H9L2 206 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 USP17L2Q6R6M4 530 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 TMCO2Q7Z6W1 182 aaPredicted RBP15.29■□□□□ 0.04
ABCD4-226ENST00000556971 KCNG4Q8TDN1 519 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 AGBL1Q96MI9 1066 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 TGS1Q96RS0 853 aaKnown RBP15.29■□□□□ 0.04
ABCD4-226ENST00000556971 OTOGLQ3ZCN5 2332 aa15.29■□□□□ 0.04
ABCD4-226ENST00000556971 ZNFX1Q9P2E3 1918 aaKnown RBP15.28■□□□□ 0.04
ABCD4-226ENST00000556971 ASNSP08243 561 aa15.28■□□□□ 0.04
ABCD4-226ENST00000556971 CST5P28325 142 aaPredicted RBP15.28■□□□□ 0.04
ABCD4-226ENST00000556971 ERVK-21P61565 698 aa15.28■□□□□ 0.04
ABCD4-226ENST00000556971 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
ABCD4-226ENST00000556971 TIGD5Q53EQ6 642 aa15.28■□□□□ 0.04
ABCD4-226ENST00000556971 RPAINQ86UA6 219 aa15.28■□□□□ 0.04
ABCD4-226ENST00000556971 PCSK9Q8NBP7 692 aaKnown RBP15.28■□□□□ 0.04
ABCD4-226ENST00000556971 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
ABCD4-226ENST00000556971 GCN1Q92616 2671 aaKnown RBP15.28■□□□□ 0.04
ABCD4-226ENST00000556971 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.04
ABCD4-226ENST00000556971 COL19A1Q14993 1142 aa15.27■□□□□ 0.04
ABCD4-226ENST00000556971 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
ABCD4-226ENST00000556971 TMEM105Q8N8V8 129 aa15.27■□□□□ 0.04
ABCD4-226ENST00000556971 MRPL38Q96DV4 380 aaKnown RBP15.27■□□□□ 0.04
ABCD4-226ENST00000556971 TET1Q8NFU7 2136 aa15.26■□□□□ 0.03
ABCD4-226ENST00000556971 B4GALT4O60513 344 aa15.26■□□□□ 0.03
ABCD4-226ENST00000556971 GDF11O95390 407 aa15.26■□□□□ 0.03
ABCD4-226ENST00000556971 LTBRP36941 435 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms