RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 UPF3BQ9BZI7 483 aaKnown RBP7.24□□□□□ -1.25
ATXN3-245ENST00000556958 SLC5A4Q9NY91 659 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 RABGAP1Q9Y3P9 1069 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 PCDHA11Q9Y5I1 949 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 OTOFQ9HC10 1997 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 ELL2O00472 640 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-245ENST00000556958 ACRP10323 421 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 CSF2RAP15509 400 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 CASP7P55210 303 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 BACE1P56817 501 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 NEUROD2Q15784 382 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 PUS10Q3MIT2 529 aaKnown RBP7.23□□□□□ -1.25
ATXN3-245ENST00000556958 ANO1Q5XXA6 986 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 OLFML2BQ68BL8 750 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 WDR18Q9BV38 432 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 YBX2Q9Y2T7 364 aaKnown RBP7.23□□□□□ -1.25
ATXN3-245ENST00000556958 SLC4A7Q9Y6M7 1214 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 PTPRZ1P23471 2315 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-245ENST00000556958 MROH7Q68CQ1 1323 aa7.23□□□□□ -1.25
ATXN3-245ENST00000556958 ZFHX2Q9C0A1 2572 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-245ENST00000556958 ATRNL1Q5VV63 1379 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 MAP3K7O43318 606 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 STRNO43815 780 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 RARBP10826 455 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 CAP2P40123 477 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 ID4P47928 161 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 PRSS12P56730 875 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 TMEM67Q5HYA8 995 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 LMBR1LQ6UX01 489 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 HFE2Q6ZVN8 426 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 TSEN34Q9BSV6 310 aaKnown RBP7.22□□□□□ -1.25
ATXN3-245ENST00000556958 STK31Q9BXU1 1019 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 IL23AQ9NPF7 189 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 XPNPEP3Q9NQH7 507 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 STARD7Q9NQZ5 370 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 LMCD1Q9NZU5 365 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 GMPR2Q9P2T1 348 aaKnown RBP7.22□□□□□ -1.25
ATXN3-245ENST00000556958 TBX21Q9UL17 535 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 MROH5Q6ZUA9 1318 aa7.22□□□□□ -1.25
ATXN3-245ENST00000556958 DNAH12Q6ZR08 3092 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 A0A1W2PQ45 241 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 A0A1W2PQY0 241 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 DDTLA6NHG4 134 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L10C9JJH3 530 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 TLR3O15455 904 aaKnown RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 PEX10O60683 326 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 LDHBP07195 334 aaKnown RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 FOXO4P98177 505 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 MTMR2Q13614 643 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 GRB14Q14449 540 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 DIXDC1Q155Q3 683 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 LEXMQ3ZCV2 418 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 SH3BP5LQ7L8J4 393 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 RPUSD2Q8IZ73 545 aaKnown RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 CRIPAKQ8N1N5 446 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 KRI1Q8N9T8 703 aaKnown RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 LINS1Q8NG48 757 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 NPLOC4Q8TAT6 608 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 ZNF594Q96JF6 807 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 MBIPQ9NS73 344 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-245ENST00000556958 NRBP1Q9UHY1 535 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 FAM50BQ9Y247 325 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 NDUFB9Q9Y6M9 179 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 XIRP2A4UGR9 3374 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 PKD1L2Q7Z442 2459 aa7.21□□□□□ -1.26
ATXN3-245ENST00000556958 MOXD2PA6NHM9 499 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 KIF28PB7ZC32 967 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 RFXAPO00287 272 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 ZMYND10O75800 440 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 KRT37O76014 449 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 IGHA2P01877 340 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 IFIT1P09914 478 aaKnown RBP7.2□□□□□ -1.26
ATXN3-245ENST00000556958 ATP2A2P16615 1042 aaKnown RBP7.2□□□□□ -1.26
ATXN3-245ENST00000556958 RABGGTBP53611 331 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 FAM47AQ5JRC9 791 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 OTOP2Q7RTS6 562 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 PRSS33Q8NF86 280 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 UBE2ZQ9H832 354 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-245ENST00000556958 GINM1Q9NU53 330 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 GAKO14976 1311 aa7.2□□□□□ -1.26
ATXN3-245ENST00000556958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-245ENST00000556958 ZBBXA8MT70 800 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L15C9J2P7 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L13C9JLJ4 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L11C9JVI0 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L18D6R9N7 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L22D6RA61 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L17D6RBQ6 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L19D6RCP7 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L20D6RJB6 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 ASNSP08243 561 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 ACLYP53396 1101 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 CALD1Q05682 793 aaKnown RBP7.19□□□□□ -1.26
ATXN3-245ENST00000556958 USP17L24Q0WX57 530 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 PICALMQ13492 652 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 METTL24Q5JXM2 366 aa7.19□□□□□ -1.26
ATXN3-245ENST00000556958 PTCRAQ6ISU1 281 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-245ENST00000556958 BMP8AQ7Z5Y6 402 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms