RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TACC3Q9Y6A5 838 aa10.94□□□□□ -0.66
HNRNPC-227ENST00000556897 ZNF532Q9HCE3 1301 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 PQBP1O60828 265 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 AKR1B1P15121 316 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 TMEM132BQ14DG7 1078 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 LCORLQ8N3X6 602 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 DYNLL2Q96FJ2 89 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 MMP19Q99542 508 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 PRDM6Q9NQX0 595 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 TMX2Q9Y320 296 aa10.93□□□□□ -0.66
HNRNPC-227ENST00000556897 A0A1W2PQ45 241 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 A0A1W2PQY0 241 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 KIAA0355O15063 1070 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 RLBP1P12271 317 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 RAG1P15918 1043 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 TAL1P17542 331 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 ICA1Q05084 483 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 FPGSQ05932 587 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 GRIN2CQ14957 1233 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 TTF1Q15361 905 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 RNF180Q86T96 592 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 ERC1Q8IUD2 1116 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 LENG1Q96BZ8 264 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 TINF2Q9BSI4 451 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 VCPKMTQ9H867 229 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 IL1RAPL2Q9NP60 686 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 SWAP70Q9UH65 585 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 NRBP1Q9UHY1 535 aa10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 ZNFX1Q9P2E3 1918 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-227ENST00000556897 TMEM265A0A087WTH1 108 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 TCRBV5S4A2TA0A5A2 114 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 SMIM22K7EJ46 135 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 GOLIM4O00461 696 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 WDR46O15213 610 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 PRKAB2O43741 272 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 SLC25A27O95847 323 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 KCTD2Q14681 263 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 USP38Q8NB14 1042 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 DNAJC2Q99543 621 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 ARMT1Q9H993 441 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 TMEM39AQ9NV64 488 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 FBXO28Q9NVF7 368 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 ADAMTS5Q9UNA0 930 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 MYO9BQ13459 2157 aa10.91□□□□□ -0.66
HNRNPC-227ENST00000556897 ROBO3Q96MS0 1386 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 CYP2D7A0A087X1C5 515 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 ADAMTS4O75173 837 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 ZNF865P0CJ78 1059 aaPredicted RBP10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 EEF2P13639 858 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 AKR1A1P14550 325 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 DNAJB2P25686 324 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 STAT3P40763 770 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 FAAP100Q0VG06 881 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 ZNF792Q3KQV3 632 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 ANKRD33Q7Z3H0 272 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 RIOX2Q8IUF8 465 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 SYMPKQ92797 1274 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 BCL11AQ9H165 835 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 DIS3Q9Y2L1 958 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 PARP14Q460N5 1801 aa10.9□□□□□ -0.66
HNRNPC-227ENST00000556897 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 DCDC2CA8MYV0 355 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 APBB1O00213 710 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 VWA5AO00534 786 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 RAD21O60216 631 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 MBD4O95243 580 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 CDK8P49336 464 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 ACLYP53396 1101 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 TIFAQ96CG3 184 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 CCDC17Q96LX7 622 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 TOX2Q96NM4 488 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 ZNF576Q9H609 170 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 STARD7Q9NQZ5 370 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 ZNF214Q9UL59 606 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 PPP1R9AQ9ULJ8 1098 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 MYH8P13535 1937 aa10.89□□□□□ -0.67
HNRNPC-227ENST00000556897 NCOR1O75376 2440 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 SYNRGQ9UMZ2 1314 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 USP17L21D6R901 530 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 CCER2I3L3R5 266 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 ABCB7O75027 752 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 TJAP1Q5JTD0 557 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 FAM83BQ5T0W9 1011 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 C12orf60Q5U649 245 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 CLASRPQ8N2M8 674 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.88□□□□□ -0.67
HNRNPC-227ENST00000556897 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms