RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PPP4R2Q9NY27 417 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 STX8Q9UNK0 236 aa27.02■■□□□ 1.92
TDP1-216ENST00000556867 PTH1RQ03431 593 aa27.01■■□□□ 1.91
TDP1-216ENST00000556867 IRF5Q13568 498 aa27.01■■□□□ 1.91
TDP1-216ENST00000556867 ATG4CQ96DT6 458 aa27.01■■□□□ 1.91
TDP1-216ENST00000556867 NUP88Q99567 741 aaPredicted RBP27.01■■□□□ 1.91
TDP1-216ENST00000556867 FBXO28Q9NVF7 368 aa27.01■■□□□ 1.91
TDP1-216ENST00000556867 COL11A1P12107 1806 aaPredicted RBP27■■□□□ 1.91
TDP1-216ENST00000556867 NBPF11Q86T75 865 aa27■■□□□ 1.91
TDP1-216ENST00000556867 ESR2Q92731 530 aa27■■□□□ 1.91
TDP1-216ENST00000556867 ZNF333Q96JL9 665 aa27■■□□□ 1.91
TDP1-216ENST00000556867 PPP1R9AQ9ULJ8 1098 aa27■■□□□ 1.91
TDP1-216ENST00000556867 ADAMTS5Q9UNA0 930 aa27■■□□□ 1.91
TDP1-216ENST00000556867 SLFN13Q68D06 897 aa26.99■■□□□ 1.91
TDP1-216ENST00000556867 CCAR1Q8IX12 1150 aaKnown RBP26.99■■□□□ 1.91
TDP1-216ENST00000556867 NKX2-3Q8TAU0 364 aa26.99■■□□□ 1.91
TDP1-216ENST00000556867 GJD2Q9UKL4 321 aa26.99■■□□□ 1.91
TDP1-216ENST00000556867 U3KPZ7 1027 aaPredicted RBP26.99■■□□□ 1.91
TDP1-216ENST00000556867 GRK4P32298 578 aa26.98■■□□□ 1.91
TDP1-216ENST00000556867 GPR142Q7Z601 462 aa26.98■■□□□ 1.91
TDP1-216ENST00000556867 SLAIN1Q8ND83 568 aa26.98■■□□□ 1.91
TDP1-216ENST00000556867 SH3TC2Q8TF17 1288 aa26.98■■□□□ 1.91
TDP1-216ENST00000556867 GMCL1Q96IK5 515 aa26.98■■□□□ 1.91
TDP1-216ENST00000556867 ESYT1Q9BSJ8 1104 aa26.98■■□□□ 1.91
TDP1-216ENST00000556867 RBBP6Q7Z6E9 1792 aaKnown RBP26.98■■□□□ 1.91
TDP1-216ENST00000556867 KIAA0100Q14667 2235 aaKnown RBP26.97■■□□□ 1.91
TDP1-216ENST00000556867 PLEKHH3Q7Z736 793 aa26.97■■□□□ 1.91
TDP1-216ENST00000556867 SOCS4Q8WXH5 440 aa26.97■■□□□ 1.91
TDP1-216ENST00000556867 SLF1Q9BQI6 1058 aa26.97■■□□□ 1.91
TDP1-216ENST00000556867 SPATC1LQ9H0A9 340 aa26.97■■□□□ 1.91
TDP1-216ENST00000556867 VWA5AO00534 786 aa26.96■■□□□ 1.91
TDP1-216ENST00000556867 SAMD1Q6SPF0 538 aaPredicted RBP26.96■■□□□ 1.91
TDP1-216ENST00000556867 PXYLP1Q8TE99 480 aa26.96■■□□□ 1.91
TDP1-216ENST00000556867 MAP4K1Q92918 833 aa26.96■■□□□ 1.91
TDP1-216ENST00000556867 MOV10L1Q9BXT6 1211 aaKnown RBP26.96■■□□□ 1.91
TDP1-216ENST00000556867 CNNM2Q9H8M5 875 aa26.96■■□□□ 1.91
TDP1-216ENST00000556867 ADCY3O60266 1144 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 TOP1P11387 765 aaKnown RBP26.95■■□□□ 1.9
TDP1-216ENST00000556867 BMP3P12645 472 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 SOX10P56693 466 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 SHCBP1Q8NEM2 672 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 TTC14Q96N46 770 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 NUDT12Q9BQG2 462 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 KRT23Q9C075 422 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 FEM1BQ9UK73 627 aa26.95■■□□□ 1.9
TDP1-216ENST00000556867 B4E1Z4 1266 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 KDM4AO75164 1064 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 CYP21A2P08686 494 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 TMEM132BQ14DG7 1078 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 MORN1Q5T089 497 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 RCSD1Q6JBY9 416 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 KIAA1211Q6ZU35 1233 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 PRPF38AQ8NAV1 312 aaKnown RBP26.94■■□□□ 1.9
TDP1-216ENST00000556867 REPS2Q8NFH8 660 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 TMEM47Q9BQJ4 181 aa26.94■■□□□ 1.9
TDP1-216ENST00000556867 CWC22Q9HCG8 908 aaKnown RBP26.94■■□□□ 1.9
TDP1-216ENST00000556867 ZNF236Q9UL36 1845 aa26.93■■□□□ 1.9
TDP1-216ENST00000556867 SLC1A4P43007 532 aa26.93■■□□□ 1.9
TDP1-216ENST00000556867 CCDC178Q5BJE1 867 aa26.93■■□□□ 1.9
TDP1-216ENST00000556867 USP6NLQ92738 828 aa26.93■■□□□ 1.9
TDP1-216ENST00000556867 LSG1Q9H089 658 aaKnown RBP26.93■■□□□ 1.9
TDP1-216ENST00000556867 CDC45O75419 566 aa26.92■■□□□ 1.9
TDP1-216ENST00000556867 ELNP15502 786 aa26.92■■□□□ 1.9
TDP1-216ENST00000556867 MCCP23508 829 aa26.92■■□□□ 1.9
TDP1-216ENST00000556867 PLS1Q14651 629 aa26.92■■□□□ 1.9
TDP1-216ENST00000556867 WDR78Q5VTH9 848 aa26.92■■□□□ 1.9
TDP1-216ENST00000556867 IQCA1Q86XH1 822 aa26.92■■□□□ 1.9
TDP1-216ENST00000556867 ZNF214Q9UL59 606 aaPredicted RBP26.92■■□□□ 1.9
TDP1-216ENST00000556867 RBM8AQ9Y5S9 174 aaKnown RBP26.92■■□□□ 1.9
TDP1-216ENST00000556867 SLC15A5A6NIM6 579 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 PLA2G6O60733 806 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 XRCC5P13010 732 aaKnown RBP26.91■■□□□ 1.9
TDP1-216ENST00000556867 ERCC3P19447 782 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 PTPREP23469 700 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 RGS19P49795 217 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 DGKHQ86XP1 1220 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 DCAF4Q8WV16 495 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 MROH8Q9H579 483 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 ZSWIM5Q9P217 1185 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 IVNS1ABPQ9Y6Y0 642 aa26.91■■□□□ 1.9
TDP1-216ENST00000556867 TMEM232C9JQI7 657 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 RGS2P41220 211 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 STAT2P52630 851 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 UBXN2AP68543 259 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 GRB14Q14449 540 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 CASC1Q6TDU7 716 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 RASGRP2Q7LDG7 609 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 FAM160B2Q86V87 743 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 RIOX2Q8IUF8 465 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 KIFC2Q96AC6 838 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 ZKSCAN3Q9BRR0 538 aa26.9■■□□□ 1.9
TDP1-216ENST00000556867 BIN2Q9UBW5 565 aaPredicted RBP26.9■■□□□ 1.9
TDP1-216ENST00000556867 SLC25A27O95847 323 aa26.89■■□□□ 1.9
TDP1-216ENST00000556867 MAP2K5Q13163 448 aa26.89■■□□□ 1.9
TDP1-216ENST00000556867 CHURC1Q8WUH1 139 aa26.89■■□□□ 1.9
TDP1-216ENST00000556867 ANKS1AQ92625 1134 aa26.89■■□□□ 1.9
TDP1-216ENST00000556867 ZSCAN10Q96SZ4 725 aaPredicted RBP26.89■■□□□ 1.9
TDP1-216ENST00000556867 APBA2Q99767 749 aa26.89■■□□□ 1.9
TDP1-216ENST00000556867 ISY1Q9ULR0 285 aaKnown RBP26.89■■□□□ 1.9
TDP1-216ENST00000556867 ATP2A1O14983 1001 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms