RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 FBXL16Q8N461 479 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 NUP133Q8WUM0 1156 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 LPAR1Q92633 364 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 GMCL1Q96IK5 515 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 TANGO6Q9C0B7 1094 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 ALDH8A1Q9H2A2 487 aaPredicted RBP16.72■□□□□ 0.27
CIPC-207ENST00000556863 GPCPD1Q9NPB8 672 aa16.72■□□□□ 0.27
CIPC-207ENST00000556863 GOLGA8BA8MQT2 603 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.27
CIPC-207ENST00000556863 SNHG28P0DPA3 235 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 BMP3P12645 472 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 SLC1A4P43007 532 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 TROAPQ12815 778 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 GRM4Q14833 912 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 TTBK2Q6IQ55 1244 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
CIPC-207ENST00000556863 ANKRD23Q86SG2 305 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 MICU3Q86XE3 530 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 IFNL1Q8IU54 200 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 CPVLQ9H3G5 476 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 FBXO28Q9NVF7 368 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 SLC12A7Q9Y666 1083 aa16.71■□□□□ 0.27
CIPC-207ENST00000556863 A0A0G2JMZ2 1700 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 COL11A1P12107 1806 aaPredicted RBP16.7■□□□□ 0.26
CIPC-207ENST00000556863 TMEM232C9JQI7 657 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 PDHXO00330 501 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 DDAH1O94760 285 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 LARGE1O95461 756 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 ZNF543Q08ER8 600 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 STAG2Q8N3U4 1231 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 MAD2L2Q9UI95 211 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 TPCN1Q9ULQ1 816 aa16.7■□□□□ 0.26
CIPC-207ENST00000556863 GOLGA8AA7E2F4 631 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 ZBTB43O43298 467 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 SLC16A2P36021 539 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 MAP2K2P36507 400 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 TM4SF4P48230 202 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 STK3Q13188 491 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 SYNE3Q6ZMZ3 975 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 CATSPERGQ6ZRH7 1159 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 ASCC2Q9H1I8 757 aaPredicted RBP16.69■□□□□ 0.26
CIPC-207ENST00000556863 HPS5Q9UPZ3 1129 aa16.69■□□□□ 0.26
CIPC-207ENST00000556863 FLOT1O75955 427 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 PARP1P09874 1014 aaKnown RBP16.68■□□□□ 0.26
CIPC-207ENST00000556863 CYP2C8P10632 490 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 PDIA3P30101 505 aaKnown RBP16.68■□□□□ 0.26
CIPC-207ENST00000556863 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
CIPC-207ENST00000556863 EVCP57679 992 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 INHBEP58166 350 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 IKQ13123 557 aaPredicted RBP16.68■□□□□ 0.26
CIPC-207ENST00000556863 ANKRD1Q15327 319 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
CIPC-207ENST00000556863 PALM3A6NDB9 673 aaPredicted RBP16.67■□□□□ 0.26
CIPC-207ENST00000556863 ST18O60284 1047 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 CALM1P0DP23 149 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 CALM2P0DP24 149 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 CALM3P0DP25 149 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 CDC27P30260 824 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 METAP2P50579 478 aaKnown RBP eCLIP16.67■□□□□ 0.26
CIPC-207ENST00000556863 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
CIPC-207ENST00000556863 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
CIPC-207ENST00000556863 PABPC4Q13310 644 aaKnown RBP eCLIP16.67■□□□□ 0.26
CIPC-207ENST00000556863 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 CMTR1Q8N1G2 835 aaKnown RBP16.67■□□□□ 0.26
CIPC-207ENST00000556863 CTCFLQ8NI51 663 aaPredicted RBP16.67■□□□□ 0.26
CIPC-207ENST00000556863 KIFC2Q96AC6 838 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 ATG4CQ96DT6 458 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 P2RX7Q99572 595 aaKnown RBP16.67■□□□□ 0.26
CIPC-207ENST00000556863 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
CIPC-207ENST00000556863 SLC45A1Q9Y2W3 748 aa16.67■□□□□ 0.26
CIPC-207ENST00000556863 NID2Q14112 1375 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 SPDYE16A6NNV3 312 aaPredicted RBP16.66■□□□□ 0.26
CIPC-207ENST00000556863 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 PEX10O60683 326 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 OSBPP22059 807 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 DSG3P32926 999 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 STAT2P52630 851 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 SNAP25P60880 206 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
CIPC-207ENST00000556863 ME3Q16798 604 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 RTN1Q16799 776 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 GPATCH4Q5T3I0 446 aaKnown RBP16.66■□□□□ 0.26
CIPC-207ENST00000556863 POTEEQ6S8J3 1075 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 FANCBQ8NB91 859 aa16.66■□□□□ 0.26
CIPC-207ENST00000556863 ZNF274Q96GC6 653 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms