RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 HAND2P61296 217 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 TFAP4Q01664 338 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 CEP95Q96GE4 821 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 PARK7Q99497 189 aaKnown RBP11.45□□□□□ -0.58
SRP54-210ENST00000556380 P2RX7Q99572 595 aaKnown RBP11.45□□□□□ -0.58
SRP54-210ENST00000556380 ESYT1Q9BSJ8 1104 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 ASCC2Q9H1I8 757 aaPredicted RBP11.45□□□□□ -0.58
SRP54-210ENST00000556380 IL17RBQ9NRM6 502 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 MTMR4Q9NYA4 1195 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 PCP11498 1178 aaKnown RBP11.44□□□□□ -0.58
SRP54-210ENST00000556380 VCAM1P19320 739 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 SP3Q02447 781 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 PABPC4Q13310 644 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-210ENST00000556380 AKNAD1Q5T1N1 836 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 CATSPERGQ6ZRH7 1159 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 STAG1Q8WVM7 1258 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 MAP4K1Q92918 833 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 FEZ1Q99689 392 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
SRP54-210ENST00000556380 VCPKMTQ9H867 229 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 CTNNA3Q9UI47 895 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 GREB1LQ9C091 1923 aaPredicted RBP11.44□□□□□ -0.58
SRP54-210ENST00000556380 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
SRP54-210ENST00000556380 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 ZNF213O14771 459 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 OSBPP22059 807 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 CTGFP29279 349 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 PSEN2P49810 448 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 ZYXQ15942 572 aaKnown RBP11.43□□□□□ -0.58
SRP54-210ENST00000556380 LPAR1Q92633 364 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
SRP54-210ENST00000556380 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 TCP11L1Q9NUJ3 509 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 PNMA3Q9UL41 463 aa11.43□□□□□ -0.58
SRP54-210ENST00000556380 RANBP6O60518 1105 aaKnown RBP11.42□□□□□ -0.58
SRP54-210ENST00000556380 NMT2O60551 498 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 CDC45O75419 566 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 CYP21A2P08686 494 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 TSPY3P0CV98 308 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 TSPY8P0CW00 308 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 GCLCP48506 637 aaPredicted RBP11.42□□□□□ -0.58
SRP54-210ENST00000556380 HERVK_113P62684 666 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 IMMTQ16891 758 aaKnown RBP11.42□□□□□ -0.58
SRP54-210ENST00000556380 MFSD6Q6ZSS7 791 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 CTU1Q7Z7A3 348 aaKnown RBP11.42□□□□□ -0.58
SRP54-210ENST00000556380 CD99L2Q8TCZ2 262 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 ERO1AQ96HE7 468 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 RNF41Q9H4P4 317 aaPredicted RBP11.42□□□□□ -0.58
SRP54-210ENST00000556380 RPAP3Q9H6T3 665 aaPredicted RBP11.42□□□□□ -0.58
SRP54-210ENST00000556380 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 RBPJLQ9UBG7 517 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 MORF4L1Q9UBU8 362 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 CLIP2Q9UDT6 1046 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 SYNPO2Q9UMS6 1093 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 TAF6LQ9Y6J9 622 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 HTTP42858 3142 aa11.42□□□□□ -0.58
SRP54-210ENST00000556380 NEDD4P46934 1319 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 TSPY2A6NKD2 308 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 F5H6K3 240 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 WDR46O15213 610 aaKnown RBP11.41□□□□□ -0.58
SRP54-210ENST00000556380 TTLL1O95922 423 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 NDUFB10O96000 172 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 NT5C2P49902 561 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
SRP54-210ENST00000556380 ATP2B2Q01814 1243 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 KLRC3Q07444 240 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 DMRTA1Q5VZB9 504 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 RCSD1Q6JBY9 416 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 ADGRD1Q6QNK2 874 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 LBX2Q6XYB7 198 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 SPICE1Q8N0Z3 855 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 ARHGAP39Q9C0H5 1083 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 TXNRD2Q9NNW7 524 aa11.41□□□□□ -0.58
SRP54-210ENST00000556380 RBM8AQ9Y5S9 174 aaKnown RBP11.41□□□□□ -0.58
SRP54-210ENST00000556380 PEX10O60683 326 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 CNMDO75829 334 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 IRX3P78415 501 aaPredicted RBP11.4□□□□□ -0.58
SRP54-210ENST00000556380 MFSD10Q14728 455 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 COG2Q14746 738 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 NECTIN1Q15223 517 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 FAM110CQ1W6H9 321 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 Q3C1V9 767 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
SRP54-210ENST00000556380 OTOP1Q7RTM1 612 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 GMCL1P1Q8NEA9 526 aa11.4□□□□□ -0.58
SRP54-210ENST00000556380 SMCR8Q8TEV9 937 aaPredicted RBP11.4□□□□□ -0.58
SRP54-210ENST00000556380 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms